Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30529
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.3  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   9.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 139 HCSYCMCLCDDATDSDRYFSLWDATS 216
           HC +   +    T   RY++ W+ T+
Sbjct: 98  HCDWLYGIFGHETSCTRYWTCWNGTA 123


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 346 CTGTQSPPSMSPLSFSVLSYTCRWNTL 266
           C+  Q   +   L+F +L+Y   WN L
Sbjct: 88  CSEVQKKQAGKILTFVLLNYRNEWNQL 114


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -3

Query: 185 SESVASSH--RHMQYEQCQNNQRHHE 114
           ++S+ + H   HMQ +  Q++Q HH+
Sbjct: 159 TQSMNNHHMGHHMQEQHPQHHQPHHQ 184


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 607 YPGPRGALGVVVADPL 560
           +P PRGALG     P+
Sbjct: 64  FPSPRGALGAYPFRPM 79


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 71  KKESVPAVVTAPRW 112
           ++ + P VVT PRW
Sbjct: 42  RRAARPGVVTTPRW 55



 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -3

Query: 185 SESVASSH--RHMQYEQCQNNQRHHE 114
           ++S+ + H   HMQ +  Q++Q HH+
Sbjct: 161 TQSMNNHHMGHHMQEQHPQHHQPHHQ 186


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 138  PEQPAPPRVHLGAVTTAGT 82
            P  PAPP+V  G  T A +
Sbjct: 1009 PVTPAPPQVTTGVDTGASS 1027


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 313 PLSFSVLSYTCRWNT 269
           PLS S+ S+ C W +
Sbjct: 202 PLSTSMRSHLCNWGS 216


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 313 PLSFSVLSYTCRWNT 269
           PLS S+ S+ C W +
Sbjct: 362 PLSTSMRSHLCNWGS 376


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 313 PLSFSVLSYTCRWNT 269
           PLS S+ S+ C W +
Sbjct: 362 PLSTSMRSHLCNWGS 376


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/37 (27%), Positives = 13/37 (35%)
 Frame = +2

Query: 545 SPEKSQWISNDNTEGSARPRVKLELKNPDIPTRXPVP 655
           SPE+   +  D   GS  P        P+     P P
Sbjct: 21  SPEEGDKLEGDEDTGSMTPNSAASPAPPEEEAASPTP 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,887
Number of Sequences: 336
Number of extensions: 3186
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)