Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30529
         (709 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708     31   1.2  
02_05_0701 + 31022485-31022648,31023569-31023611,31023712-310237...    31   1.2  
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995...    30   2.1  
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991...    30   2.1  
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150...    28   6.3  
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989...    28   8.4  

>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
          Length = 2033

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 407 RKPGHRFGRSRLALRTRPDRCQVQNAGCTSTLRDRSTPFNYTTGRLS 547
           + P +RFGRS  +LR   D  +V+NAG    L  RS P  + +  ++
Sbjct: 491 KHPWNRFGRSEASLRVAYDYTKVENAG---ELLRRSEPSGFRSSSIA 534


>02_05_0701 +
           31022485-31022648,31023569-31023611,31023712-31023777,
           31024007-31024062,31024091-31024190,31024290-31024472,
           31024953-31025001,31025089-31025169,31025209-31025268,
           31025394-31025514,31025612-31025693,31025783-31025868,
           31026011-31026111,31026246-31026387,31026488-31026638,
           31026710-31026937
          Length = 570

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 246 AAIIKHGRVFHLQVYESTLKERGLIEGGDWVPVQKFDPLDPQFKDGVDY 392
           AA I H   +++      L ER L++ G   P +K+ PL P+F +   Y
Sbjct: 343 AANISHREFYNVWQRFGVLPERYLLDFGMLHPTEKYYPLRPEFAESTFY 391


>09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,
            9957000-9957227,9959102-9959235,9959319-9959402,
            9959539-9959829,9960076-9960405,9960526-9960668,
            9960970-9961126,9961210-9961313,9961423-9961583,
            9961664-9961980,9962094-9962375,9962471-9962772,
            9962848-9962938,9963262-9963338,9963428-9963587,
            9963682-9963766,9963838-9963949,9964864-9964943,
            9968644-9968981
          Length = 1386

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 103  TKVDSWWRWLFWHC 144
            T++  WWRW +W C
Sbjct: 1301 TRIPIWWRWYYWIC 1314


>09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,
            9919056-9919283,9919628-9919761,9919842-9919925,
            9920007-9920297,9920569-9920901,9921029-9921171,
            9921266-9921379,9921470-9921626,9921709-9921812,
            9921914-9922074,9922158-9922474,9922574-9922855,
            9923205-9923506,9923603-9923693,9923864-9923917,
            9924052-9924128,9924213-9924372,9924473-9924557,
            9924635-9924723,9925791-9925925
          Length = 1341

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 103  TKVDSWWRWLFWHC 144
            T++  WWRW +W C
Sbjct: 1256 TRIPIWWRWYYWVC 1269


>09_02_0504 - 10013784-10014041,10014558-10014660,10014932-10015093,
            10015416-10015549,10015633-10015716,10015839-10016129,
            10016362-10016694,10016823-10016965,10017273-10017429,
            10017513-10017616,10017728-10017888,10017971-10018287,
            10018396-10018677,10018759-10019226,10019338-10019391,
            10019689-10019742,10019943-10020021,10020108-10020196,
            10021153-10021273,10022321-10022637
          Length = 1236

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 106  KVDSWWRWLFWHC 144
            ++  WWRW +W C
Sbjct: 1152 RIPVWWRWYYWMC 1164


>09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,
            9893330-9893557,9894095-9894261,9894312-9894395,
            9894614-9894820,9894919-9895251,9895371-9895513,
            9895607-9895723,9895824-9895980,9896054-9896157,
            9896272-9896432,9896518-9896707,9896732-9896834,
            9896950-9897231,9897327-9897649,9897750-9897786,
            9898109-9898162,9898292-9898368,9898449-9898502,
            9898738-9898822,9900289-9900426,9900592-9900603
          Length = 1150

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 106  KVDSWWRWLFWHC 144
            ++  WWRW +W C
Sbjct: 1066 RIPIWWRWYYWIC 1078


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,957,430
Number of Sequences: 37544
Number of extensions: 396781
Number of successful extensions: 1213
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)