Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30529
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150283-1|AAI50284.1| 2080|Homo sapiens peroxisomal proliferato...    30   7.1  
AM050949-1|CAJ19486.1|  107|Homo sapiens immunoglobulin heavy ch...    30   7.1  
AL121829-16|CAI95749.1| 2080|Homo sapiens RP4-697K14.7 protein.        30   7.1  
AF517673-1|AAM74197.1| 2080|Homo sapiens peroxisomal proliferato...    30   7.1  
AB201715-1|BAE46995.1| 2649|Homo sapiens PPAR gamma DBD-interact...    30   7.1  
AB051556-1|BAB21860.2| 2114|Homo sapiens KIAA1769 protein protein.     30   7.1  

>BC150283-1|AAI50284.1| 2080|Homo sapiens peroxisomal
            proliferator-activated receptor A interacting complex 285
            protein.
          Length = 2080

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 266  SVFNNRSPVTTLLLLTSEVASQRLKYL--SESVASSHRHMQYEQCQNNQRHH 117
            S+   R  +   L LT E AS +LK L  + SV  S R + YE+ +   R H
Sbjct: 848  SLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQH 899


>AM050949-1|CAJ19486.1|  107|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 107

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = +1

Query: 124 RWLFWHCSYCMCLCDDATDSDRYFSLWDATSDVNNNKVVTGLRLLNTEEYSIYKCTRA 297
           +W+ W  +Y     D+ T + R+      T+D + +     LR L +++ ++Y C RA
Sbjct: 30  KWMGWISTYS----DNTTYAQRFQGRVIMTTDTSTSTAYMELRSLRSDDTAVYYCARA 83


>AL121829-16|CAI95749.1| 2080|Homo sapiens RP4-697K14.7 protein.
          Length = 2080

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 266  SVFNNRSPVTTLLLLTSEVASQRLKYL--SESVASSHRHMQYEQCQNNQRHH 117
            S+   R  +   L LT E AS +LK L  + SV  S R + YE+ +   R H
Sbjct: 848  SLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQH 899


>AF517673-1|AAM74197.1| 2080|Homo sapiens peroxisomal
            proliferator-activated receptor A interacting complex-285
            peptide protein.
          Length = 2080

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 266  SVFNNRSPVTTLLLLTSEVASQRLKYL--SESVASSHRHMQYEQCQNNQRHH 117
            S+   R  +   L LT E AS +LK L  + SV  S R + YE+ +   R H
Sbjct: 848  SLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQH 899


>AB201715-1|BAE46995.1| 2649|Homo sapiens PPAR gamma DBD-interacting
            protein1 beta protein.
          Length = 2649

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 266  SVFNNRSPVTTLLLLTSEVASQRLKYL--SESVASSHRHMQYEQCQNNQRHH 117
            S+   R  +   L LT E AS +LK L  + SV  S R + YE+ +   R H
Sbjct: 1417 SLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQH 1468


>AB051556-1|BAB21860.2| 2114|Homo sapiens KIAA1769 protein protein.
          Length = 2114

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 266  SVFNNRSPVTTLLLLTSEVASQRLKYL--SESVASSHRHMQYEQCQNNQRHH 117
            S+   R  +   L LT E AS +LK L  + SV  S R + YE+ +   R H
Sbjct: 882  SLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQH 933


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,326,280
Number of Sequences: 237096
Number of extensions: 2080089
Number of successful extensions: 11152
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11152
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)