Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30529
         (709 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   5.0  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   6.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   6.6  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.7  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 519 GVDLSRSVDVHPAF*T 472
           G D+S   DVHP F T
Sbjct: 83  GYDISNYTDVHPIFGT 98


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 519 GVDLSRSVDVHPAF*T 472
           G D+S   DVHP F T
Sbjct: 83  GYDISNYTDVHPIFGT 98


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -1

Query: 106 WCCDHRW 86
           W C+HRW
Sbjct: 378 WICEHRW 384


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = -1

Query: 364 SKGSNFCTGTQSPPSMSPLSFSVLSYTCR 278
           +K   FC     P   S   FS   Y CR
Sbjct: 67  TKCEGFCNSQVQPSVASTTGFSKECYCCR 95


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = -1

Query: 364 SKGSNFCTGTQSPPSMSPLSFSVLSYTCR 278
           +K   FC     P   S   FS   Y CR
Sbjct: 67  TKCEGFCNSQVQPSVASTTGFSKECYCCR 95


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 138 PEQPAPPRVHLGAVTTAGTLSF 73
           PE   P   HLG +  + T+SF
Sbjct: 194 PEDKCPFTEHLGYLIFSSTISF 215


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,717
Number of Sequences: 438
Number of extensions: 4121
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)