Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30527
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   2.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   2.9  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   2.9  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   5.0  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   5.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   5.0  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 111 NLPDATYITCSRC 149
           +LPDA +  CS+C
Sbjct: 66  HLPDALHTECSKC 78


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 13  PSLYDTIGDLV 45
           P LYD IGDLV
Sbjct: 191 PILYDHIGDLV 201


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 111 NLPDATYITCSRC 149
           N+PDA    CS+C
Sbjct: 68  NMPDAIETDCSKC 80


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 114 LPDATYITCSRC 149
           LPDA +  CS+C
Sbjct: 67  LPDALHSGCSKC 78


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 114 LPDATYITCSRC 149
           LPDA    CS+C
Sbjct: 77  LPDALVTNCSKC 88


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 121 SGKFTLRAGSLRAHIAHTIPSH 56
           S +FT      R H  HT  SH
Sbjct: 266 SNRFTRHLIQRRTHTRHTTTSH 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,501
Number of Sequences: 336
Number of extensions: 1360
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)