Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30526
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein. 30 8.9
BC070110-1|AAH70110.1| 855|Homo sapiens chromosome X open readi... 30 8.9
BC033709-1|AAH33709.1| 855|Homo sapiens chromosome X open readi... 30 8.9
BC011483-1|AAH11483.1| 855|Homo sapiens chromosome X open readi... 30 8.9
AL606833-4|CAI41231.1| 566|Homo sapiens novel protein protein. 30 8.9
AL606833-3|CAI41230.1| 855|Homo sapiens novel protein protein. 30 8.9
AL590808-3|CAI41596.1| 566|Homo sapiens novel protein protein. 30 8.9
AL590808-2|CAI41594.1| 855|Homo sapiens novel protein protein. 30 8.9
AK024253-1|BAB14859.1| 533|Homo sapiens protein. 30 8.9
AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein. 30 8.9
AJ131187-1|CAA10317.1| 1685|Homo sapiens APC2 protein protein. 30 8.9
AJ012652-1|CAB61207.1| 733|Homo sapiens APC2 protein protein. 30 8.9
AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible... 30 8.9
AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible... 30 8.9
AF128222-1|AAF01784.1| 733|Homo sapiens adenomatous polyposis c... 30 8.9
AF110334-1|AAD28183.1| 1246|Homo sapiens APC2 protein protein. 30 8.9
AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein. 30 8.9
AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein. 30 8.9
AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein. 30 8.9
AB022529-1|BAA75469.1| 2303|Homo sapiens APCL protein. 30 8.9
AB012162-1|BAA34611.1| 2303|Homo sapiens APCL protein protein. 30 8.9
>BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein.
Length = 2432
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 209 SSHQRXPDAIAAGHAASVADRAPSTLVPGVSTNDDLSCQTS 331
SSH++ P A +A ++D AP++L G S++ +C TS
Sbjct: 306 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 345
>BC070110-1|AAH70110.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 29.9 bits (64), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 591 VHVARGPEGNAVRVPPAAALVHWQGLRPG 505
+ + +GP N V VP A V +G++PG
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPG 653
>BC033709-1|AAH33709.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 29.9 bits (64), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 591 VHVARGPEGNAVRVPPAAALVHWQGLRPG 505
+ + +GP N V VP A V +G++PG
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPG 653
>BC011483-1|AAH11483.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 29.9 bits (64), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 591 VHVARGPEGNAVRVPPAAALVHWQGLRPG 505
+ + +GP N V VP A V +G++PG
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPG 653
>AL606833-4|CAI41231.1| 566|Homo sapiens novel protein protein.
Length = 566
Score = 29.9 bits (64), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 591 VHVARGPEGNAVRVPPAAALVHWQGLRPG 505
+ + +GP N V VP A V +G++PG
Sbjct: 336 IRILQGPHANPVAVPQPGASVQTKGIKPG 364
>AL606833-3|CAI41230.1| 855|Homo sapiens novel protein protein.
Length = 855
Score = 29.9 bits (64), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 591 VHVARGPEGNAVRVPPAAALVHWQGLRPG 505
+ + +GP N V VP A V +G++PG
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPG 653
>AL590808-3|CAI41596.1| 566|Homo sapiens novel protein protein.
Length = 566
Score = 29.9 bits (64), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 591 VHVARGPEGNAVRVPPAAALVHWQGLRPG 505
+ + +GP N V VP A V +G++PG
Sbjct: 336 IRILQGPHANPVAVPQPGASVQTKGIKPG 364
>AL590808-2|CAI41594.1| 855|Homo sapiens novel protein protein.
Length = 855
Score = 29.9 bits (64), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 591 VHVARGPEGNAVRVPPAAALVHWQGLRPG 505
+ + +GP N V VP A V +G++PG
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPG 653
>AK024253-1|BAB14859.1| 533|Homo sapiens protein.
Length = 533
Score = 29.9 bits (64), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 591 VHVARGPEGNAVRVPPAAALVHWQGLRPG 505
+ + +GP N V VP A V +G++PG
Sbjct: 303 IRILQGPHANPVAVPQPGASVQTKGIKPG 331
>AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein.
Length = 2488
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 209 SSHQRXPDAIAAGHAASVADRAPSTLVPGVSTNDDLSCQTS 331
SSH++ P A +A ++D AP++L G S++ +C TS
Sbjct: 329 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 368
>AJ131187-1|CAA10317.1| 1685|Homo sapiens APC2 protein protein.
Length = 1685
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 394 DYGVIGRVAQVIVDALPFXAVGGLA--RKVIVRRDARHQGRWSPVSDTSCV 248
D G +G + ++ A+G A R ++ R A+HQ + VS SCV
Sbjct: 47 DLGAVGMLRNLVHSKHKMIAMGSAAALRNLLAHRPAKHQAAATAVSPGSCV 97
>AJ012652-1|CAB61207.1| 733|Homo sapiens APC2 protein protein.
Length = 733
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 394 DYGVIGRVAQVIVDALPFXAVGGLA--RKVIVRRDARHQGRWSPVSDTSCV 248
D G +G + ++ A+G A R ++ R A+HQ + VS SCV
Sbjct: 664 DLGAVGMLRNLVHSKHKMIAMGSAAALRNLLAHRPAKHQAAATAVSPGSCV 714
>AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1d protein.
Length = 2432
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 209 SSHQRXPDAIAAGHAASVADRAPSTLVPGVSTNDDLSCQTS 331
SSH++ P A +A ++D AP++L G S++ +C TS
Sbjct: 306 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 345
>AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1 protein.
Length = 2429
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 209 SSHQRXPDAIAAGHAASVADRAPSTLVPGVSTNDDLSCQTS 331
SSH++ P A +A ++D AP++L G S++ +C TS
Sbjct: 306 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 345
>AF128222-1|AAF01784.1| 733|Homo sapiens adenomatous polyposis coli
homolog APC2 protein.
Length = 733
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 394 DYGVIGRVAQVIVDALPFXAVGGLA--RKVIVRRDARHQGRWSPVSDTSCV 248
D G +G + ++ A+G A R ++ R A+HQ + VS SCV
Sbjct: 664 DLGAVGMLRNLVHSKHKMIAMGSAAALRNLLAHRPAKHQAAATAVSPGSCV 714
>AF110334-1|AAD28183.1| 1246|Homo sapiens APC2 protein protein.
Length = 1246
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 394 DYGVIGRVAQVIVDALPFXAVGGLA--RKVIVRRDARHQGRWSPVSDTSCV 248
D G +G + ++ A+G A R ++ R A+HQ + VS SCV
Sbjct: 390 DLGAVGMLRNLVHSKHKMIAMGSAAALRNLLAHRPAKHQAAATAVSPGSCV 440
>AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein.
Length = 2429
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 209 SSHQRXPDAIAAGHAASVADRAPSTLVPGVSTNDDLSCQTS 331
SSH++ P A +A ++D AP++L G S++ +C TS
Sbjct: 306 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 345
>AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein.
Length = 2365
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 209 SSHQRXPDAIAAGHAASVADRAPSTLVPGVSTNDDLSCQTS 331
SSH++ P A +A ++D AP++L G S++ +C TS
Sbjct: 242 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 281
>AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein.
Length = 2464
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 209 SSHQRXPDAIAAGHAASVADRAPSTLVPGVSTNDDLSCQTS 331
SSH++ P A +A ++D AP++L G S++ +C TS
Sbjct: 338 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 377
>AB022529-1|BAA75469.1| 2303|Homo sapiens APCL protein.
Length = 2303
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 394 DYGVIGRVAQVIVDALPFXAVGGLA--RKVIVRRDARHQGRWSPVSDTSCV 248
D G +G + ++ A+G A R ++ R A+HQ + VS SCV
Sbjct: 665 DLGAVGMLRNLVHSKHKMIAMGSAAALRNLLAHRPAKHQAAATAVSPGSCV 715
>AB012162-1|BAA34611.1| 2303|Homo sapiens APCL protein protein.
Length = 2303
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 394 DYGVIGRVAQVIVDALPFXAVGGLA--RKVIVRRDARHQGRWSPVSDTSCV 248
D G +G + ++ A+G A R ++ R A+HQ + VS SCV
Sbjct: 665 DLGAVGMLRNLVHSKHKMIAMGSAAALRNLLAHRPAKHQAAATAVSPGSCV 715
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,343,774
Number of Sequences: 237096
Number of extensions: 1964808
Number of successful extensions: 4965
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4962
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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