Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30526
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical pr...    31   0.78 
AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical...    31   1.0  
AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical...    29   3.1  
AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical...    29   4.1  
Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical p...    28   5.5  
U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astaci...    28   5.5  
Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U23516-8|AAG38879.1|  167|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass...    27   9.6  
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass...    27   9.6  
AF038613-12|AAB92046.3|  328|Caenorhabditis elegans Hypothetical...    27   9.6  
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a...    27   9.6  

>Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical
           protein W07G4.3 protein.
          Length = 820

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +3

Query: 285 WCLASLRTMTFRARPPT-AKKGSASTITCATRPITP*SLTEQTSS 416
           W L SL    ++  PP   K G+ +T   ++RP+TP    E+  S
Sbjct: 535 WALKSLSGKFYKGPPPAEVKPGAPATADTSSRPVTPNPTAEKEKS 579


>AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical
           protein Y73F8A.20 protein.
          Length = 541

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 567 GNAVRVPPAAALVHWQGLRPGXMG-SVGGLWSGARQQTSMY 448
           G + + PP A+L HW  L+ G  G S     +G + QT+++
Sbjct: 329 GQSQKAPPMASLWHWASLKVGSSGISANVKKNGEKSQTTLH 369


>AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical
           protein Y17G7B.19 protein.
          Length = 272

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 368 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRP 487
           C +  ++I + G    ++ +  GPCS++ID C   PD+ P
Sbjct: 101 CYSKKSSICSTGGTPFEVELSDGPCSNHID-C--NPDELP 137


>AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical
           protein Y51H7C.13 protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
 Frame = +3

Query: 327 PPTAKKGSASTITCATRPITP*SLTEQTSSI*ESAVARVHRTSTSAVWLPTRD-RQQIPS 503
           PP     + +T T  TRP  P      T    E  +   + T   A W P  +   + P+
Sbjct: 133 PPCIPPTTTTTTTTTTRPPCPYPPATNTPPAPEPTLPYEYTTQPPATWPPVENTTPEQPT 192

Query: 504 XPAGDPANE 530
            P   P+ E
Sbjct: 193 VPTPGPSRE 201


>Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical
           protein Y57G11C.5 protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 567 GNAVRVPPAAALVHWQGLRPGXMGSVGGL 481
           G + + PP A+L HW  LR G  G  G +
Sbjct: 304 GQSQKAPPMASLWHWAHLRVGSEGIRGNV 332


>U41554-3|AAA83298.2|  745|Caenorhabditis elegans Nematode astacin
           protease protein38 protein.
          Length = 745

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 27/84 (32%), Positives = 36/84 (42%)
 Frame = +3

Query: 228 PTQLQPVTQLVSLTGLHRPWCLASLRTMTFRARPPTAKKGSASTITCATRPITP*SLTEQ 407
           P    P+ ++   T    P  + S  T T      TAKK    T    T P+TP  LT  
Sbjct: 499 PPTTAPLPEISETTQKPEPTTVQSTTTYTTAIPRRTAKK-QFFTRKPITIPLTP--LTSS 555

Query: 408 TSSI*ESAVARVHRTSTSAVWLPT 479
           +++  ES    V  T+ S  WLPT
Sbjct: 556 STTT-ESTT--VSSTTQSTTWLPT 576


>Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical
           protein F15D4.4 protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 22/54 (40%), Positives = 26/54 (48%)
 Frame = +3

Query: 297 SLRTMTFRARPPTAKKGSASTITCATRPITP*SLTEQTSSI*ESAVARVHRTST 458
           S  T T  + P T+   S ST T +T   T  + T  TSS   SA  R  RTST
Sbjct: 523 SSTTSTEASTPTTSTSTSTSTSTPSTTTST--TSTSTTSSTSSSAPIRAVRTST 574


>U23516-8|AAG38879.1|  167|Caenorhabditis elegans Hypothetical
           protein B0416.2 protein.
          Length = 167

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +3

Query: 123 VQASTHRLSRVGVRAEHGHRGSGVDH*SDLHISEXPTQLQPVTQLVSLTGLHRPWCLASL 302
           +QAS H+ S+  V+     R S      D++ISE  T  +    +V L     P+ L ++
Sbjct: 81  LQASGHKFSKTHVQCLEEDRPSCHGVKDDMYISECVTVYENANTMVRLFNSFGPYRLGTI 140

Query: 303 R 305
           R
Sbjct: 141 R 141


>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 308, isoform e protein.
          Length = 2702

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 429 AVARVHRTSTSAVWLPTRDRQQIPSXPAGDPANEPGLRLAEP 554
           A+ +V  TST  V + T  RQ   +  AGD  +E  + L  P
Sbjct: 645 ALPKVKETSTHTVTVATSFRQIFSTMSAGDEISEANVELTIP 686


>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 308, isoform c protein.
          Length = 7548

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 429  AVARVHRTSTSAVWLPTRDRQQIPSXPAGDPANEPGLRLAEP 554
            A+ +V  TST  V + T  RQ   +  AGD  +E  + L  P
Sbjct: 5491 ALPKVKETSTHTVTVATSFRQIFSTMSAGDEISEANVELTIP 5532


>AF038613-12|AAB92046.3|  328|Caenorhabditis elegans Hypothetical
           protein F42A6.1 protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 173 MFCAHADARKPMSRSLYIFGYYSQNITLTISNXQCS 66
           ++C  +DAR    R   +    S  +TLT+S  +C+
Sbjct: 25  LWCILSDARNRNRREFLLVASQSVTVTLTVSTSECA 60


>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 168 protein.
          Length = 1347

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 330  PTAKKGSASTITCATRPITP*SLTEQTSSI*ESAVARVHRTSTS 461
            P AKK SA +     +P     LT++TS + +S+     +TST+
Sbjct: 1289 PVAKKSSAGSAGAGAKP-----LTKKTSDVGKSSAPNARKTSTA 1327


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,265,739
Number of Sequences: 27780
Number of extensions: 278533
Number of successful extensions: 908
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)