Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30523
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    25   0.54 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.94 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   3.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.8  

>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 534 DSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVEL 641
           +  +++   ++KP V YSD+  M   +  I+EA+ L
Sbjct: 24  EEQVALFGKEKKPIVSYSDLQEMKYLELVIKEALRL 59


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 333 LYFFLCMQIFFLQVSLFIFNVLFL 262
           L+F LC+  F+    +F  ++LFL
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFL 163



 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 339 YALYFFLCMQIFFLQVSLFIFNVLFL 262
           YA    LC+  F+    +F  ++LFL
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFL 130


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 336 HTVCSSCHWTVS*GS*SKYRHSWQH 410
           HT CS C  T   GS    RH   H
Sbjct: 72  HTECSKCSETQKNGSKKIMRHLIDH 96


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 675 GIEPPRGVL-MYGPPGCGKTMLAKAVAHHTKLHSFVS 782
           G+  P  +L + G  G GKT L   +  HT  +  VS
Sbjct: 99  GVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVS 135


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 675 GIEPPRGVL-MYGPPGCGKTMLAKAVAHHTKLHSFVS 782
           G+  P  +L + G  G GKT L   +  HT  +  VS
Sbjct: 99  GVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVS 135


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 238 KNVRVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQN 390
           KN   L V+  +I D    L  EYL+  + V   + +PL I +  E + QN
Sbjct: 347 KNNIKLYVRRVFIMDNCEELIPEYLNFIKGVVDSEDLPLNISR--EMLQQN 395


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 505 AQLTSCLLKPTAQSLCCKLMRNLMFNI 585
           + +T+ LL PT  S+    + N+ FN+
Sbjct: 516 SDITTRLLLPTVLSMANDKVANVRFNV 542


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,639
Number of Sequences: 336
Number of extensions: 4040
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)