Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30523
(811 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 170 1e-42
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 5e-25
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 107 8e-24
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 81 8e-16
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 81 8e-16
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 9e-14
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 75 9e-14
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 2e-13
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 67 1e-11
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 60 3e-09
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 59 4e-09
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 54 1e-07
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 54 2e-07
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 45 2e-06
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 45 8e-05
SB_732| Best HMM Match : AAA (HMM E-Value=0) 39 0.004
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 39 0.004
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 38 0.007
SB_48094| Best HMM Match : MMR_HSR1 (HMM E-Value=0.82) 36 0.051
SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11) 33 0.36
SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_50520| Best HMM Match : zf-DNL (HMM E-Value=3.4) 31 1.1
SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1) 31 1.1
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 31 1.1
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 31 1.1
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 31 1.5
SB_18883| Best HMM Match : DUF734 (HMM E-Value=8.4) 31 1.5
SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_33075| Best HMM Match : Big_2 (HMM E-Value=1.7) 30 1.9
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 30 2.6
SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8) 30 2.6
SB_12505| Best HMM Match : FHA (HMM E-Value=0.097) 30 2.6
SB_27422| Best HMM Match : Dynamin_N (HMM E-Value=3) 29 3.4
SB_55513| Best HMM Match : Pox_A32 (HMM E-Value=0.056) 29 4.5
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 29 4.5
SB_52778| Best HMM Match : BK_channel_a (HMM E-Value=2.3) 29 5.9
SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 29 5.9
SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 28 7.8
SB_14925| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 28 7.8
SB_31| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 28 7.8
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 170 bits (414), Expect = 1e-42
Identities = 89/120 (74%), Positives = 95/120 (79%)
Frame = +1
Query: 238 KNVRVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTG 417
K + LEVQEEYIKDEQ+NLKKE LHAQEEVKRIQSVPLVIGQFLEAVDQNTGIV STTG
Sbjct: 48 KQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVASTTG 107
Query: 418 SNYYVRILSTIDRELLKPSASVALHKHSNAQLTSCLLKPTAQSLCCKLMRNLMFNIRILE 597
SNYYVRILSTID+ELLKPSASVALHKHSNA + +L P A S L N+ E
Sbjct: 108 SNYYVRILSTIDKELLKPSASVALHKHSNALVD--ILPPEADSSIAMLTNEEKPNVSYAE 165
Score = 157 bits (382), Expect = 8e-39
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = +3
Query: 510 VDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPP 689
VD+LPPEADSSI+ML +EKP+V Y++IGGMD QKQEIREAVELPLTH ELY+QIGI+PP
Sbjct: 139 VDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPP 198
Query: 690 RGVLMYGPPGCGKTMLAKAVAHHT 761
RGVL+YGPPGCGKTMLAKAVAHHT
Sbjct: 199 RGVLLYGPPGCGKTMLAKAVAHHT 222
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 104 MEEIGIILPEKDDQVTDSKGLA--FAGPQSFDELESEDLYTKYKKLQRMLEF*KYKKSTL 277
MEEIGII P++D + A + S + E +DLY YKKL++ LEF + ++ +
Sbjct: 1 MEEIGIIQPQEDKSTSSRPTTAGTISSLCSPVDPEMDDLYITYKKLEKQLEFLEVQEEYI 60
Query: 278 KMNNET*RKNI 310
K + +K +
Sbjct: 61 KDEQKNLKKEL 71
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 111 bits (268), Expect = 5e-25
Identities = 48/84 (57%), Positives = 68/84 (80%)
Frame = +3
Query: 510 VDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPP 689
V VL +AD +++++ ++ P Y+DIGG+DTQ QEI+E+VELPLTH ELY ++GI+PP
Sbjct: 355 VGVLSDDADPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPP 414
Query: 690 RGVLMYGPPGCGKTMLAKAVAHHT 761
+GV++YG PG GKT+LAKAVA+ T
Sbjct: 415 KGVILYGQPGTGKTLLAKAVANQT 438
Score = 62.5 bits (145), Expect = 4e-10
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = +1
Query: 253 LEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNY 426
L ++EE+I++++R +E H +E +V ++ P+ +G E +D N IV ++ GS +
Sbjct: 267 LLMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEH 326
Query: 427 YVRILSTIDRELLKPSASVAL-HK 495
YV ILS +D++LL+P +V L HK
Sbjct: 327 YVSILSFVDKDLLEPGCTVLLNHK 350
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 107 bits (258), Expect = 8e-24
Identities = 46/81 (56%), Positives = 62/81 (76%)
Frame = +3
Query: 519 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGV 698
LPP+ D +++M+Q +EKPDV YSDIGG Q ++RE VE PL H E + +GIEPP+GV
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGV 121
Query: 699 LMYGPPGCGKTMLAKAVAHHT 761
L++GPPG GKT+ A+AVA+ T
Sbjct: 122 LLFGPPGTGKTLCARAVANRT 142
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 101 bits (243), Expect = 5e-22
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +3
Query: 528 EADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMY 707
E D +S++ ++ PD Y +GG+D Q +EI+E +ELP+ H EL+ +GI+ P+GVL+Y
Sbjct: 158 EVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLY 217
Query: 708 GPPGCGKTMLAKAVAHHTK 764
GPPG GKT+LA+AVAHHT+
Sbjct: 218 GPPGTGKTLLARAVAHHTE 236
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 89.4 bits (212), Expect = 3e-18
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +3
Query: 540 SISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPG 719
S+ ++ K V + IGG+ TQ Q +RE +E+PLT+ EL+ G+ PPRG+L+YGP G
Sbjct: 241 SVIKKDSEAKKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSG 300
Query: 720 CGKTMLAKAVAHHTKLHSF 776
GKTM+A+AVA+ T +H F
Sbjct: 301 TGKTMIARAVANETGVHFF 319
Score = 89.0 bits (211), Expect = 4e-18
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +3
Query: 564 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAK 743
E P V +SD+GG + K++++EAVE PL H E ++++GI PPRG+LMYGPPGC KT++A+
Sbjct: 530 EVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIAR 589
Query: 744 AVAHHTKLHSFVSSDQSLY 800
A+A + L+ L+
Sbjct: 590 ALATESGLNFIAIKGPELF 608
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 81.4 bits (192), Expect = 8e-16
Identities = 31/68 (45%), Positives = 50/68 (73%)
Frame = +3
Query: 519 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGV 698
LP E D + + ++ ++ YSD+GG+ Q +E+RE +ELPLT+ EL++++GI PP+G
Sbjct: 113 LPREVDPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGC 172
Query: 699 LMYGPPGC 722
L++GPPGC
Sbjct: 173 LLFGPPGC 180
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/81 (28%), Positives = 46/81 (56%)
Frame = +1
Query: 247 RVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNY 426
R L+ + + ++++ ++ KEY ++ ++K +QSV ++G+ L+ + + IV +T G Y
Sbjct: 22 RELDARLKEMREQLKDFTKEYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRY 81
Query: 427 YVRILSTIDRELLKPSASVAL 489
V +D+ LK VAL
Sbjct: 82 VVGCRRQVDKAKLKQGTRVAL 102
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 81.4 bits (192), Expect = 8e-16
Identities = 34/73 (46%), Positives = 54/73 (73%)
Frame = +3
Query: 564 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAK 743
E P+V + DIGG++ K+E++E V+ P+ H + + + G+ P +GVL YGPPGCGKT+LAK
Sbjct: 303 EVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 362
Query: 744 AVAHHTKLHSFVS 782
A+A+ + +F+S
Sbjct: 363 AIANECQA-NFIS 374
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 74.5 bits (175), Expect = 9e-14
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = +3
Query: 579 QYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 758
++ D+GG++ KQ +R+A+E PL H E + ++G+ PRGVL+YGPPGC KT L +A A
Sbjct: 482 RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASS 541
Query: 759 T 761
T
Sbjct: 542 T 542
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 516 VLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRG 695
V+ + + +I ++ D + G+D + ++E V+ PL + E + +GI P+G
Sbjct: 188 VITEKTNINIESVKVGSSVDSGNIILSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKG 247
Query: 696 VLMYGPPGCGKTML 737
+L+ G PG GKT+L
Sbjct: 248 ILLVGAPGVGKTLL 261
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 74.5 bits (175), Expect = 9e-14
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = +3
Query: 579 QYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 758
++ D+GG++ KQ +R+A+E PL H E + ++G+ PRGVL+YGPPGC KT L +A A
Sbjct: 11 RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASS 70
Query: 759 T 761
T
Sbjct: 71 T 71
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +3
Query: 537 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPP 716
S + A + PD+ + D+GG+D+ K+EI + ++LPL H EL+ G+ GVL+YGPP
Sbjct: 796 SHADAIGAPKIPDISWKDVGGLDSVKEEILDTIQLPLLHPELF-AAGLR-RSGVLLYGPP 853
Query: 717 GCGKTMLAKAVAHHTKLH 770
G GKT++AKAVA L+
Sbjct: 854 GTGKTLMAKAVATECSLN 871
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/73 (38%), Positives = 49/73 (67%)
Frame = +3
Query: 537 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPP 716
+ + + D K V++ +GG++ Q Q ++E + PL + E++ + I PPRGVL +GPP
Sbjct: 870 ADVDPMSVDRK--VKFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPP 927
Query: 717 GCGKTMLAKAVAH 755
G GKT++A+A+A+
Sbjct: 928 GTGKTLVARALAN 940
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 60.9 bits (141), Expect = 1e-09
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +3
Query: 564 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAK 743
+ P+V ++DI + K+ + EAV LPL + ++ I P RGVLM GPPG GKTMLAK
Sbjct: 243 KNPNVHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIR-RPWRGVLMVGPPGTGKTMLAK 301
Query: 744 AVA 752
AVA
Sbjct: 302 AVA 304
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 59.7 bits (138), Expect = 3e-09
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = +3
Query: 564 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAK 743
+K ++ D+ GM K E+ E V+ L Y Q+G + P+G L+ GPPG GKT+LAK
Sbjct: 118 DKGSARFKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIPKGALLVGPPGTGKTLLAK 176
Query: 744 AVA 752
AVA
Sbjct: 177 AVA 179
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 59.3 bits (137), Expect = 4e-09
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +3
Query: 558 ADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTML 737
A + V+++DIGG +++ + + + + H E++ +G+ P G L++GPPGCGKT+L
Sbjct: 668 ASTQSSVKFADIGGCSNTLEQVGKLL-VHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLL 726
Query: 738 AKAVA 752
A A+A
Sbjct: 727 AHAIA 731
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +3
Query: 579 QYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVA 752
++ D+ G + K EI E V L + + Y ++G + P+G ++ GPPG GKT+LAKAVA
Sbjct: 46 EWIDVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVA 102
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/47 (46%), Positives = 35/47 (74%)
Frame = +3
Query: 642 PLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTKLHSFVS 782
P+ H E + +G+ P G+L+ GPPGCGKT+LAKA+A+ + + +F+S
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGI-NFIS 47
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/47 (46%), Positives = 35/47 (74%)
Frame = +3
Query: 642 PLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTKLHSFVS 782
P+ H E + +G+ P G+L+ GPPGCGKT+LAKA+A+ + + +F+S
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGI-NFIS 47
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +3
Query: 600 MDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTKLHSFV 779
+D K+E++E VE L + E ++++G + P GVL+ G PG GKT+LAKAVA + F
Sbjct: 136 VDEAKEELQEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFFF 194
Query: 780 SS 785
S
Sbjct: 195 CS 196
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 45.2 bits (102), Expect(2) = 2e-06
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +3
Query: 564 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPP-RGVLMYG 710
EKP+V++SDI G+++ K+ ++EAV LP+ L+ G P RG+L+YG
Sbjct: 90 EKPNVKWSDIAGLESAKEALKEAVILPIKFPHLF--TGKRTPWRGILLYG 137
Score = 24.6 bits (51), Expect(2) = 2e-06
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 717 GCGKTMLAKAVAHHTKLHSFVSSDQS 794
G GK+ LAKAVA +F+S S
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSS 200
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 516 VLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRG 695
V+ + + +I ++ D + G+D + ++E V+ PL + E + +GI P+G
Sbjct: 18 VITEKTNINIESVKVGSSVDSGNIILSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKG 77
Query: 696 VLMYGPPGCGKTML 737
+L+ G PG GKT+L
Sbjct: 78 ILLVGAPGVGKTLL 91
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 46.0 bits (104), Expect = 4e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 510 VDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEI 623
++ LP E DS + ++ DE+P QYSDIGG+D Q QE+
Sbjct: 129 LEKLPAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQEM 166
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 582 YSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHT 761
+ ++GG+ K ++E + P L+ + + G+L+YGPPG GKT+LA VA
Sbjct: 666 WENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAKEC 725
Query: 762 KLHSFVS 782
L +F+S
Sbjct: 726 GL-NFIS 731
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +3
Query: 621 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAV 749
+R A L ++ ++G++ +G+L++GPPG GKT++A+ +
Sbjct: 160 VRRAFATRLFPADVVDKMGLKHVKGILLFGPPGTGKTLMARQI 202
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 690 RGVLMYGPPGCGKTMLAKAVAHHT 761
R +L YGPPG GKTM AK++A H+
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHS 353
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 663 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVA 752
Y GI RG L+YGPPGCGK+ +A+A
Sbjct: 214 YMDRGIPYRRGYLLYGPPGCGKSSFIQALA 243
>SB_48094| Best HMM Match : MMR_HSR1 (HMM E-Value=0.82)
Length = 896
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 573 DVQYSDIGGMDTQKQEIREAVELPLTHVELYR-QIGIEPPRGVLMYGPPGCGKTMLAKAV 749
D + + + TQK++I E + L + + I P +++ GP CGKT L + +
Sbjct: 101 DSERDALEALRTQKEKIEEELAASLVSAQYFPLDERIHTPCSLMVVGPSQCGKTTLIQQL 160
Query: 750 AHH 758
HH
Sbjct: 161 IHH 163
>SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11)
Length = 806
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 675 GIEPPRGVLMYGPPGCGKTMLAKAVAHHTKLH 770
G+ P R ++ GPP GKT++ K + H KLH
Sbjct: 355 GLLPVRACIL-GPPASGKTLVVKQLCTHYKLH 385
>SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 612 KQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKT 731
K+E++ + + L++VELY+++ +G YG CG T
Sbjct: 33 KKEVQNSSIIDLSYVELYQKVNFLNLKGANSYGQLACGHT 72
>SB_50520| Best HMM Match : zf-DNL (HMM E-Value=3.4)
Length = 277
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 337 IQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILST-IDRELLKPS--ASVALHKHSN 504
+Q V+G + ++ Q T + +TTG + +RI S +D E + + ++LHKHSN
Sbjct: 61 LQITTAVLGVYSWSLLQFTLVTTATTGKDNKIRIASNKVDAEKVDKAIDRKISLHKHSN 119
>SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1)
Length = 235
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 226 QETPKNVRVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIV 402
Q T ++ E + +DE+R+ KE + +V+R++S V FL QN GIV
Sbjct: 24 QATDTEMKPQEDRHAEAQDEERDSVKEKNRQRSDVERLRSTYHVSESFLAMDKQNEGIV 82
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 630 AVELPLTHVELYRQI-GIEPPRGVLMYGPPGCGKTMLAKAVA 752
A+ P T R + ++ PR +L+ G PG GKT L A+A
Sbjct: 1597 ALSAPTTSQNATRILRALQLPRPILLEGSPGVGKTSLVSAIA 1638
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 570 PDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTML 737
PDV Y D D + E V+ T ++ + R +L+ GP GCGKT L
Sbjct: 326 PDVSYFDAA--DLLGEVFVETVDTVRTR--MFMDLASTSGRNILLTGPRGCGKTSL 377
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 171 NAKPFESVTWSSFSGKIIPISSIVSIAKRFRVL 73
N KP VTWS G IP +S+ FRV+
Sbjct: 266 NGKPPPRVTWSKVGGASIPFVQSLSVNDNFRVV 298
>SB_18883| Best HMM Match : DUF734 (HMM E-Value=8.4)
Length = 204
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -3
Query: 320 CACKYSFFKFRCSSLMYSSCTSRTLTFFGVSCTLCINLQIRVHQKI 183
C C YS+F RC + + TS C+N+ +RV +++
Sbjct: 2 CKCVYSYFNKRCQRALCRTRTSFNAIRMAEQSDNCLNMYLRVLKQV 47
>SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 570 PDVQYSDIGGMDTQKQEIREAVELPL 647
PDV++ DI G+D K+ ++EAV P+
Sbjct: 52 PDVRWDDIIGLDAAKRLVKEAVVYPI 77
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 699 LMYGPPGCGKTMLAKAVAHH 758
L+ GPPG GKT LA +A H
Sbjct: 384 LLCGPPGLGKTTLAHVIAQH 403
>SB_33075| Best HMM Match : Big_2 (HMM E-Value=1.7)
Length = 334
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Frame = +1
Query: 208 RFIHKVQETPKNVR-VLEVQEEYIKDEQRNLKKEYLHAQEEVKRI------QSVPLVIGQ 366
RFI ++ + N V E I++E N + L + VK +SV + +
Sbjct: 132 RFIRSMKSSDNNNNAVTRNSSEKIEEESENFQNTSLKSDAFVKAELALSGEKSVDISVDI 191
Query: 367 FLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNAQLTSCLLKPTAQS 546
L+++D + G + S+ +++ + P+ VAL + ++ Q+ +PTA S
Sbjct: 192 TLDSIDVDDGDIEVGDNSS------KQMEKRSVSPTPRVALSRANSTQIADSYRRPTAHS 245
Query: 547 L 549
L
Sbjct: 246 L 246
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = +1
Query: 220 KVQETPKNVRVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNT-- 393
K +E + +R LE + + E+RN++K+YL Q E + + S L + + NT
Sbjct: 621 KRKEIWREIRELETILKDVHKEKRNIEKKYLAFQHENREL-SRSLNSSRSPTGLSPNTSP 679
Query: 394 ----GIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNAQLTS 519
G++ + G +L ++ L+K S + K N+ ++S
Sbjct: 680 NRGIGMLVVSPGKTRTASLLERVNNLLMKTSMPNGVKKELNSPVSS 725
>SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8)
Length = 796
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 651 HVELYRQIGIEP---PRGVLMYGPPGCGKT 731
H E RQ GI+P P L+ GP CGKT
Sbjct: 74 HREALRQRGIDPKNIPFNALIVGPTSCGKT 103
>SB_12505| Best HMM Match : FHA (HMM E-Value=0.097)
Length = 629
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 214 IHKVQETPKNVRVLEVQEEYIKDEQRNLKKEYLHAQEEVKRI-QSVPLVIGQFLEAVDQN 390
+H++ + P V ++E+Y D+Q L+K+ L +E+++ + + V + +D+
Sbjct: 271 MHEIAQGPLQESVRALEEQYQADKQGALEKQRLMYEEKIEELKKEVQMSPFGSRPQIDRT 330
Query: 391 TGIVGSTTGSNYYVRILSTIDREL 462
+ + S+ S Y R+ DREL
Sbjct: 331 SSL--SSFSSGYGSRMSWYEDREL 352
>SB_27422| Best HMM Match : Dynamin_N (HMM E-Value=3)
Length = 485
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 678 IEPPRGVLMYGPPGCGKTMLAKAVAHH 758
I P +++ GP CGKT L + + HH
Sbjct: 6 IHTPCSLMVVGPSQCGKTTLIQQLIHH 32
>SB_55513| Best HMM Match : Pox_A32 (HMM E-Value=0.056)
Length = 937
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 651 HVELYRQIGIEPPRGVLMYGPPGCGKT 731
H+E+ R G P L+ GP CGKT
Sbjct: 468 HLEIKRTAGGSVPFNALIVGPTSCGKT 494
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 247 RVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVG 405
+V + +++ K Q + KE+ + V+ + V+GQ +++VD+ G+VG
Sbjct: 8 KVQDAEQKVTKGFQE-VGKEFQVVGQHVQSVDEKVGVVGQHVQSVDEKVGVVG 59
>SB_52778| Best HMM Match : BK_channel_a (HMM E-Value=2.3)
Length = 179
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 730 LCWLKLLRITLSCIHSCRXIRVC 798
LCWL L L+C+ S R + VC
Sbjct: 42 LCWLPFLSTYLTCLFSDRRLSVC 64
>SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 690 RGVLMYGPPGCGKTMLAKAVAHHTK 764
R V++YG GCGKT L +A K
Sbjct: 445 RVVVLYGESGCGKTSLMAKIATQVK 469
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 684 PPRGVLMYGPPGCGKTMLAKAVA 752
PP V + GPP GKT++AK +A
Sbjct: 318 PPCKVCVLGPPHSGKTLVAKQLA 340
>SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = +2
Query: 140 DQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEF*KYKKSTLKMN 286
++ T+ + LAF ++ DE ++++ T+ +KLQR+ + K+ + N
Sbjct: 174 NETTEERKLAFENLKAKDEKSAKEIETQMRKLQRIQDNISQLKAKMASN 222
>SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1533
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +1
Query: 256 EVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVR 435
E+ E I D K+YL EE+ ++ LVIG + V +N T +
Sbjct: 684 EMLPEDITDGVSIQYKQYLKKDEELSSVEEPQLVIGGEEDRVSKNDNDANLATDAGVVHT 743
Query: 436 ILSTIDREL 462
+DREL
Sbjct: 744 PNDGVDREL 752
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 696 VLMYGPPGCGKTMLAKAVA 752
+L YGPPG GKT AVA
Sbjct: 13 LLFYGPPGTGKTSTILAVA 31
>SB_14925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 730 VLPQPGGPYMSTPRGGSIPICRYNST*VRGSSTASLISCFCVS 602
++P+PG Y T G S C N+T V G T +C C S
Sbjct: 48 MVPRPGFSYQGTKNGCSSSPCPVNTTCVPG-PTQDTHTCACPS 89
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 238 KNVRVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVP 351
+ VR+ E +EE K E+R KE VKR+ +P
Sbjct: 601 EKVRLKEEEEERKKQEERKKAKEAGRRPSPVKRVSRIP 638
>SB_31| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 902
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 223 VQETPKNVRVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 342
V+ NVR LEV ++ D R+L+ H + V+ +Q
Sbjct: 546 VRHLDDNVRHLEVSVRHLDDNVRHLQVSVRHLDDNVRHLQ 585
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 223 VQETPKNVRVLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 342
V+ NVR LEV ++ D R+L+ H + V+ +Q
Sbjct: 714 VRHLDDNVRHLEVSVRHLDDNVRHLQVSVRHLDDNVRHLQ 753
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,753,007
Number of Sequences: 59808
Number of extensions: 483124
Number of successful extensions: 2038
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2034
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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