Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30523
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    25   2.8  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   3.7  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    24   6.4  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   8.4  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 490 HKHSNAQLTSCLLKPTAQSLCCKLMRNLMFNIRILEAW 603
           HK+       CLL PT+ S  C +   L  N +  ++W
Sbjct: 6   HKNGGCSYI-CLLNPTSYSCACPIGIQLKDNGKTCKSW 42


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +1

Query: 253 LEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 396
           L+  ++ ++D+Q+N+        E+ +++  V   IGQ LE   Q+TG
Sbjct: 423 LKHSQQLLRDKQKNMNSSDAAYLEDKRKLTKVEGQIGQ-LERELQSTG 469


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 709 PYMSTPRGGSIPICRYNST 653
           PY    RG  I +C Y++T
Sbjct: 37  PYSKCKRGNRITVCSYSAT 55


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 442 REYGHNNLSQWCCQLCLYF 386
           RE G NN   W C+ C  F
Sbjct: 73  RELGRNNQLLWLCKNCNEF 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,815
Number of Sequences: 2352
Number of extensions: 14716
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)