Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30517
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56323| Best HMM Match : CDtoxinA (HMM E-Value=2.3) 38 0.007
SB_20852| Best HMM Match : PC_rep (HMM E-Value=1.8e-13) 35 0.046
SB_38834| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 29 3.0
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35) 29 4.0
SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36) 28 5.3
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 28 7.0
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 28 7.0
SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07) 28 7.0
SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18) 28 7.0
SB_22623| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 28 7.0
SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3) 28 7.0
SB_55857| Best HMM Match : STN (HMM E-Value=6) 28 7.0
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 28 7.0
SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_50539| Best HMM Match : IL17 (HMM E-Value=4.1) 27 9.3
SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18) 27 9.3
>SB_56323| Best HMM Match : CDtoxinA (HMM E-Value=2.3)
Length = 290
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 506 QGTVTLCPAHANRRLLNQPALAGLLVVLTAFLDCXTI 616
+GT+T+ P H++R LL A+ GLL VL +FLD I
Sbjct: 39 KGTLTVGPYHSDRSLLMPVAVGGLLTVLVSFLDVKNI 75
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 441 YHGKSPVHLFMVRLAQGLCHAGK 509
Y+ K +LFMVRLAQGL H GK
Sbjct: 17 YYHKDANNLFMVRLAQGLVHMGK 39
>SB_20852| Best HMM Match : PC_rep (HMM E-Value=1.8e-13)
Length = 638
Score = 35.1 bits (77), Expect = 0.046
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 133 SVQAVATLGVAVIALAEETGAEMCTRIFGQL 225
S Q +A LG+A+IA+ EE GA+M R F L
Sbjct: 608 SHQGIAVLGIALIAMGEEIGAQMGLRAFNHL 638
>SB_38834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 35.1 bits (77), Expect = 0.046
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 133 SVQAVATLGVAVIALAEETGAEMCTRIFGQL 225
S Q +A LG+A+IA+ EE GA+M R F L
Sbjct: 46 SHQGIAVLGIALIAMGEEIGAQMGLRAFNHL 76
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 29.1 bits (62), Expect = 3.0
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 618 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSC 671
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +S+ ES + E A AA L
Sbjct: 672 KVFPLPEPAVAAFESIKKTVEEAFVSSIDESIPFEVETDASEVALAATL 720
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 264 LAIALCSVSNPQLSVIDVLNKYSHDSDNDVA 356
L ALC S L ++D+L K H D+D+A
Sbjct: 485 LLSALCLYSEQGLGLLDILTKLRHLDDDDLA 515
>SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35)
Length = 1171
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -1
Query: 377 HGEYGXVSDVVIRIVGVFIEHVDDGELRVGHGAQGDGERHGRRTAGSPY 231
+GE G ++ ++ V+I G+L + +G DG+ TAG Y
Sbjct: 289 YGEEGITKNINENLIEVYITVACTGDLGISNGRIPDGQLSSSSTAGLNY 337
>SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 748
Score = 28.3 bits (60), Expect = 5.3
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G + +YS + +
Sbjct: 173 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLVSYYSQWIPAYSDRIKPITSC 226
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 227 KVFPLPEPAVAAFESIKKTVEEAFVSAIDESIPFEVETDASEVALAATL 275
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 571 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSC 624
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 625 KVFPLPEPAVAAFESIKKTVEEAFVSAIDESIPFEVETDASEVALAATL 673
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 618 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSC 671
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 672 KVFPLPEPAVAAFESIKKTVEEAFVSAIDESIPFEVETDASEVALAATL 720
>SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07)
Length = 409
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 29 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSC 82
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 83 KVFPLPEPAVAAFESIKKTVEEAFVSAIDESIPFEVETDASEVALAATL 131
>SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18)
Length = 802
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 515 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSC 568
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 569 KVFPLPEPAVAAFESIKKTVEEAFVSAIDESIPFEVETDASEVALAATL 617
>SB_22623| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 391
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 197 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSC 250
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 251 KVFPLPEPAVAAFESIKKTVEEAFVSAIDESIPFEVETDASEVALAATL 299
>SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3)
Length = 360
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 43 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKQITSC 96
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 97 KVFPLPEPAVAAFESIKKTVEEAFVSAIDESIPFEVETDASDVALAATL 145
>SB_55857| Best HMM Match : STN (HMM E-Value=6)
Length = 262
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 68 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSC 121
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 122 KVFPLPEPAVAAFESIKKTVEEAFVSAIDESIPFEVETDASEVALAATL 170
>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 1048
Score = 27.9 bits (59), Expect = 7.0
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -2
Query: 568 ERGLVEQAPVRVRGTQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPA 389
E G + P R+R R LP P S+++NRC G +YS + +
Sbjct: 618 EEGNISPDPERLRPL---RELPV---PSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSC 671
Query: 388 PTSPMANMAL*A-TSLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
P+ A+ A S+ ++ E +++ ES + E A AA L
Sbjct: 672 KVFPLPEPAVAAFESIKKTVEKAFVSAIDESIPFEVETDASEVALAATL 720
>SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 125 SCPRC-KPWRPLASRSSHW-PRKRAPKCAPASSDNWVGTGSRQCGGRAARHRPVLRVQPA 298
+CP C K + P W P PK ++D V R+ R++ + + PA
Sbjct: 50 TCPHCRKGYHPWNQEVVLWIPSDFTPKNKNHTTDQIVLEEKRKAQSAINRYKQFMNIYPA 109
Query: 299 ALRH 310
L+H
Sbjct: 110 HLKH 113
>SB_50539| Best HMM Match : IL17 (HMM E-Value=4.1)
Length = 456
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 131 PRCKPWRPLASRSSHWPRKRAPKCAPASSDNWVGT 235
P C+ + + +PRK PKC P SD + T
Sbjct: 125 PECRQETTIVKKLQRYPRKDPPKC-PNPSDPYCST 158
>SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18)
Length = 1046
Score = 27.5 bits (58), Expect = 9.3
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = -2
Query: 526 TQGHRALPA*HSPCASRTMNRCTGDLPWYSASARSIVASLALXVPAPTSPMANMAL*A-T 350
T G R L P S+++NRC G +YS + + P+ A+ A
Sbjct: 22 TNGLRPLRRATVPSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSCKVFPLPEPAVAAFE 81
Query: 349 SLSESWEYLLSTSMTESCGLDTEHRAMASGTAAAL 245
S+ ++ E +++ ES + E A AA L
Sbjct: 82 SIKKTVEEAFVSAIDESIPFEVETDASEVALAATL 116
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.130 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,239,160
Number of Sequences: 59808
Number of extensions: 261188
Number of successful extensions: 874
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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