Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30517
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145304-1|AAF08385.1|  919|Drosophila melanogaster 26S proteaso...   101   6e-22
AF132182-1|AAD34770.1|  919|Drosophila melanogaster unknown prot...   101   6e-22
AE014296-3245|AAF49095.2|  919|Drosophila melanogaster CG7762-PA...   101   6e-22

>AF145304-1|AAF08385.1|  919|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p97 protein.
          Length = 919

 Score =  101 bits (243), Expect = 6e-22
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 261 PLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYXAIFAMGLVGAGTXNXXXXXXXXXXXX 440
           PLA+ L S SNP+L++ID L+K+SHDSD +VA+ AIFAMGLVGAGT N            
Sbjct: 702 PLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQ 761

Query: 441 YHGKSPVHLFMVRLAQGLCHAGK 509
           YH K P +LFMVR+AQ L H GK
Sbjct: 762 YHSKDPSNLFMVRIAQSLTHLGK 784



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +1

Query: 127 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPAV 249
           LS+ Q++A LG+A+IA+ E+ GAEM  R FG L RY EPA+
Sbjct: 657 LSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAI 697



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 16/38 (42%), Positives = 27/38 (71%)
 Frame = +2

Query: 506 QGTVTLCPAHANRRLLNQPALAGLLVVLTAFLDCXTII 619
           +GT++L P H++R+L+N  A+AGL+  L + LD   +I
Sbjct: 784 KGTLSLSPYHSDRQLMNPMAVAGLMATLVSLLDVKNLI 821


>AF132182-1|AAD34770.1|  919|Drosophila melanogaster unknown
           protein.
          Length = 919

 Score =  101 bits (243), Expect = 6e-22
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 261 PLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYXAIFAMGLVGAGTXNXXXXXXXXXXXX 440
           PLA+ L S SNP+L++ID L+K+SHDSD +VA+ AIFAMGLVGAGT N            
Sbjct: 702 PLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQ 761

Query: 441 YHGKSPVHLFMVRLAQGLCHAGK 509
           YH K P +LFMVR+AQ L H GK
Sbjct: 762 YHSKDPSNLFMVRIAQSLTHLGK 784



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +1

Query: 127 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPAV 249
           LS+ Q++A LG+A+IA+ E+ GAEM  R FG L RY EPA+
Sbjct: 657 LSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAI 697



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 16/38 (42%), Positives = 27/38 (71%)
 Frame = +2

Query: 506 QGTVTLCPAHANRRLLNQPALAGLLVVLTAFLDCXTII 619
           +GT++L P H++R+L+N  A+AGL+  L + LD   +I
Sbjct: 784 KGTLSLSPYHSDRQLMNPMAVAGLMATLVSLLDVKNLI 821


>AE014296-3245|AAF49095.2|  919|Drosophila melanogaster CG7762-PA
           protein.
          Length = 919

 Score =  101 bits (243), Expect = 6e-22
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 261 PLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYXAIFAMGLVGAGTXNXXXXXXXXXXXX 440
           PLA+ L S SNP+L++ID L+K+SHDSD +VA+ AIFAMGLVGAGT N            
Sbjct: 702 PLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQ 761

Query: 441 YHGKSPVHLFMVRLAQGLCHAGK 509
           YH K P +LFMVR+AQ L H GK
Sbjct: 762 YHSKDPSNLFMVRIAQSLTHLGK 784



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +1

Query: 127 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPAV 249
           LS+ Q++A LG+A+IA+ E+ GAEM  R FG L RY EPA+
Sbjct: 657 LSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAI 697



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 16/38 (42%), Positives = 27/38 (71%)
 Frame = +2

Query: 506 QGTVTLCPAHANRRLLNQPALAGLLVVLTAFLDCXTII 619
           +GT++L P H++R+L+N  A+AGL+  L + LD   +I
Sbjct: 784 KGTLSLSPYHSDRQLMNPMAVAGLMATLVSLLDVKNLI 821


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.130    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,797,282
Number of Sequences: 53049
Number of extensions: 391745
Number of successful extensions: 1622
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)