Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30517
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    27   0.19 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   0.45 
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       21   7.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -1

Query: 290 GHGAQGDGERHGRRTAGSPYLPSCPKMRVHISAPVSSANAMTATP 156
           G  + GD E H    + +P  P CP+ R   S   S   + T  P
Sbjct: 545 GSTSSGDDELHRASLSKTPQPPQCPRFRKLDSPSDSGIESGTEKP 589


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 283 EHRAMASGTAAALPAPRTYPV 221
           EH A  S TAAA P P + PV
Sbjct: 39  EHLAGTSTTAAATPTPPSVPV 59


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 591 VSTTSRPASAGWLSRRR 541
           V TT  PA   W+ R+R
Sbjct: 51  VLTTGLPALISWIKRKR 67


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 493 SPCASRTMNRCTGDL 449
           +PC   T N CT +L
Sbjct: 433 NPCTHTTTNGCTAEL 447


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 493 SPCASRTMNRCTGDL 449
           +PC   T N CT +L
Sbjct: 419 NPCTHTTTNGCTAEL 433


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 493 SPCASRTMNRCTGDL 449
           +PC   T N CT +L
Sbjct: 453 NPCTHTTTNGCTAEL 467


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 493 SPCASRTMNRCTGDL 449
           +PC   T N CT +L
Sbjct: 402 NPCTHTTTNGCTAEL 416


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 365 GXVSDVVIRIVGVFIEHVDDGELR 294
           G   D+ +   G  I H +DGE +
Sbjct: 324 GYCIDMEVPYSGTLISHYEDGETK 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.130    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,507
Number of Sequences: 438
Number of extensions: 2065
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)