Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30516
         (691 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BU08 Cluster: Chromosome undetermined scaffold_128, w...    34   3.8  
UniRef50_UPI0000DD7B62 Cluster: PREDICTED: hypothetical protein;...    33   5.0  
UniRef50_Q9EMF0 Cluster: AMV256; n=1; Amsacta moorei entomopoxvi...    33   8.7  

>UniRef50_A0BU08 Cluster: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 638

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 21/80 (26%), Positives = 36/80 (45%)
 Frame = +2

Query: 104 TIVTYRGAHL*NHSETVLFTFTVICKYLIIFLYYSLAARSGSARVFNKNFTIFDVVLFFK 283
           T V Y   ++ + S  +     ++C Y I  L  +L    GS +     FT+ ++  +F 
Sbjct: 15  TFVIYLICYILSGSIVISVAILLLCLYKIAHLICTLITFPGSVKSLYYKFTLLNLSDYFV 74

Query: 284 *KNTYCGIIIIVRHMLPHRF 343
              T   + II+  M PHR+
Sbjct: 75  -SRTLQNLTIIINSMNPHRY 93


>UniRef50_UPI0000DD7B62 Cluster: PREDICTED: hypothetical protein;
           n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
           protein - Homo sapiens
          Length = 182

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +2

Query: 20  LYKNCYTFPLLSALFYCYTYLVNWSYGTTIVTYRGAHL*NHSETVLFTFTVICKYLIIFL 199
           +Y   YT+  +    Y YTY+  ++Y   + TY   ++  ++ T  FT+     Y  ++ 
Sbjct: 61  IYTYTYTYIYIYTYIYIYTYINTYTY---VYTYTFTYVYTYTYTYTFTYVYTYTYTYVYT 117

Query: 200 Y 202
           Y
Sbjct: 118 Y 118


>UniRef50_Q9EMF0 Cluster: AMV256; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV256 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 609

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -2

Query: 555 KIVHCLEATLFPSDIGIIFLKKIWDPY*NSNNVTQYEKNI*NILH 421
           K++H +E  L    I        W+ Y NSNN+  Y  NI NI H
Sbjct: 42  KLIHLIEHILVSMLIVYTGELSFWNGYTNSNNINIYYNNIMNISH 86


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,550,924
Number of Sequences: 1657284
Number of extensions: 12297789
Number of successful extensions: 22003
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21990
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)