Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30514
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    97   1e-20
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    97   1e-20
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    33   0.13 
AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical ...    33   0.22 
Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z54327-8|CAA91121.2|  451|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z48716-2|CAA88597.2|  169|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 38/70 (54%), Positives = 54/70 (77%)
 Frame = +1

Query: 256 IWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLE 435
           IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++D  +++ EWGKCL 
Sbjct: 195 IWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLG 254

Query: 436 LDELEMEERC 465
           L E E++ERC
Sbjct: 255 LKEGEIQERC 264



 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
 Frame = +2

Query: 2   RCLCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERR 181
           RCLC   S +C       V +EY G C+++ +CTE  M+ FP RM DWLF +M+++ +RR
Sbjct: 109 RCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRR 168

Query: 182 ELTPHYLXMER---EAESN 229
           EL  H L  E    EAE++
Sbjct: 169 EL--HKLEWEELLSEAEND 185


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 38/70 (54%), Positives = 54/70 (77%)
 Frame = +1

Query: 256 IWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLE 435
           IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++D  +++ EWGKCL 
Sbjct: 195 IWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLG 254

Query: 436 LDELEMEERC 465
           L E E++ERC
Sbjct: 255 LKEGEIQERC 264



 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
 Frame = +2

Query: 2   RCLCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERR 181
           RCLC   S +C       V +EY G C+++ +CTE  M+ FP RM DWLF +M+++ +RR
Sbjct: 109 RCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRR 168

Query: 182 ELTPHYLXMER---EAESN 229
           EL  H L  E    EAE++
Sbjct: 169 EL--HKLEWEELLSEAEND 185


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +1

Query: 259 WKWCDLDAQTNDRFVSRHELFPIRAPLMA---LEHCIAPFLDRCDADDDHRVTLAEWGKC 429
           WK+  L+   N+  + R E  P ++ L+    +  C       CD + D ++T  EW KC
Sbjct: 176 WKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTFDEWRKC 234

Query: 430 L 432
           +
Sbjct: 235 I 235


>AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical
           protein C54E4.2a protein.
          Length = 226

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
 Frame = +1

Query: 208 GAGGGIKPHASLGQCRI---WKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDR 378
           GA   +K H+    CR+   W +   D   + + +S+ EL PI       E C+  F+D 
Sbjct: 65  GADHTLKLHSV--PCRVEVGWMFNQWDGNQDGK-LSKAELRPIERG--GNEACVEEFIDM 119

Query: 379 C-DADDDHRVTLAEWGKCLEL-DELEMEERCDDFNENAEHYL 498
           C D   D  +++ EW  C    D+L  E  C     + + +L
Sbjct: 120 CDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDVDPHL 161



 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +1

Query: 244 GQCRIWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWG 423
           G   + +WCD    ++D    RHE    +A      H +  FL RCD +  ++      G
Sbjct: 127 GSISVDEWCDCFTFSDDL---RHEPPCHKAKHDVDPHLLGVFLPRCDLEGFYKPEQCHDG 183

Query: 424 KCLELDELEME 456
            C  +D    E
Sbjct: 184 NCWCVDRYGRE 194


>Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical
           protein F53H10.2 protein.
          Length = 900

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = +1

Query: 229 PHASLG---QCRIWKWCDLDAQTNDR 297
           PH +LG   Q R+ KWCD    T++R
Sbjct: 451 PHINLGKNYQARVKKWCDRQVSTSER 476


>AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical
           protein C54E4.2b protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +1

Query: 349 EHCIAPFLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERCDDFNENAEHYL 498
           E C+  F+D C D   D  +++ EW  C    D+L  E  C     + + +L
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDVDPHL 169



 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +1

Query: 244 GQCRIWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWG 423
           G   + +WCD    ++D    RHE    +A      H +  FL RCD +  ++      G
Sbjct: 135 GSISVDEWCDCFTFSDDL---RHEPPCHKAKHDVDPHLLGVFLPRCDLEGFYKPEQCHDG 191

Query: 424 KCLELDELEME 456
            C  +D    E
Sbjct: 192 NCWCVDRYGRE 202


>Z54327-8|CAA91121.2|  451|Caenorhabditis elegans Hypothetical
           protein C26D10.3 protein.
          Length = 451

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 179 RELTPHYLXMEREAESNLTRR---WANAVYGNGAIWTLRPMI 295
           + L+ HY+  E+ A++ L      WA  V  N  +W +  M+
Sbjct: 265 QNLSVHYMDKEKMADNQLNPDIFIWAGGVTANSEVWAMNKML 306


>AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical
           protein B0524.7 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 433 ELDELEMEERCDDFNENAE 489
           E+++LE E RC   NENAE
Sbjct: 193 EIEKLETEMRCQKMNENAE 211


>Z48716-2|CAA88597.2|  169|Caenorhabditis elegans Hypothetical
           protein F59B10.3 protein.
          Length = 169

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 143 WLFNIMRDMAERRELTPHY 199
           WLFN  +D  ++REL  HY
Sbjct: 115 WLFNRSKDKQQKRELYEHY 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,993,158
Number of Sequences: 27780
Number of extensions: 259928
Number of successful extensions: 624
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)