Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30514
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.4  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   9.8  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/46 (19%), Positives = 20/46 (43%)
 Frame = +1

Query: 187 DPSLPXDGAGGGIKPHASLGQCRIWKWCDLDAQTNDRFVSRHELFP 324
           +  LP   +   ++P + +    +W+ C   +   +   SR + FP
Sbjct: 80  EEKLPKTSSNASVEPDSKVTYSGLWRVCVAISSRMEYECSRIDYFP 125


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 184 LSTFSHVAHDVKKPVPHATGEVRH 113
           +++FSH + DVK  +  ATG   H
Sbjct: 276 IASFSHRSIDVKDGIVLATGITVH 299


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 65  EYYGTCREMPDCTESEMSDFPRRMRD 142
           +Y    + MPD  E+E+SD    +RD
Sbjct: 74  QYARVQQSMPDGWETEISDQMLELRD 99


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 184 LSTFSHVAHDVKKPVPHATGEVRH 113
           +++FSH + DVK  +  ATG   H
Sbjct: 276 IASFSHRSIDVKDGIVLATGITVH 299


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 452 WRSAATISMKTLNTICSAP*CYKHRHLT*HKLD 550
           WR+   I +KT+  I  A    KHR +    +D
Sbjct: 609 WRNQKDIDVKTVQVIEDAAQKKKHRAIRPEPID 641


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 269 AIWTLRPMIDSCPVTSCSP 325
           A+W L   I S P+  C P
Sbjct: 162 AVWVLAGAITSPPLLGCFP 180


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 370 LDRCDADDDHRVTLAEWGKCLE 435
           LD    D D  + +A++G C E
Sbjct: 113 LDNVLLDQDGHIKIADFGMCKE 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,285
Number of Sequences: 438
Number of extensions: 3036
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)