Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30513
         (484 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   2.4  
AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.        23   7.3  
AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.        23   7.3  
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    22   9.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 36   NAIKCLKCRTKLI 74
            N +KC +CR KLI
Sbjct: 1392 NCVKCTRCRPKLI 1404


>AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 403 SFHS-VFDLFNFNAFSDNIGLSTWLLVKCTGGKTVSPH 293
           S H+   ++ NF     + GL+   L+KC+ GK V  H
Sbjct: 82  SLHAHALNVMNFIGTLIDYGLNDPALLKCSLGKLVRNH 119


>AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 403 SFHS-VFDLFNFNAFSDNIGLSTWLLVKCTGGKTVSPH 293
           S H+   ++ NF     + GL+   L+KC+ GK V  H
Sbjct: 82  SLHAHALNVMNFIGTLIDYGLNDPALLKCSLGKLVRNH 119


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 220 KGRLNCEKCSCRSDHSTIFLGEN 288
           K +L C  CS  SD+  I L E+
Sbjct: 33  KSQLFCSACSSLSDYGLIELKEH 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,400
Number of Sequences: 2352
Number of extensions: 8484
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)