Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30513
         (484 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   2.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 385 DLFNFNAFSDNIGLSTWLLVKCTGGKT 305
           +LF+   F+ NI  ST LL K  GG +
Sbjct: 106 ELFDATVFTYNITNSTPLLKKLYGGNS 132


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 181 EWIKSRIEKEQWTKGRLNCEKCSCRSDHSTIFLGENVN 294
           +W     E  + T G +  E C   S++STI  G N N
Sbjct: 198 DWQPEDEECTEATAGAVVLETCQRNSNNSTITAG-NAN 234


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +1

Query: 220 KGRLNCEKCSCRSDHSTIFLGENVNVVKQF 309
           K  L C+KCS    +      EN    +Q+
Sbjct: 145 KSNLKCDKCSTYQSNGEEVCLENCTGYQQY 174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,957
Number of Sequences: 438
Number of extensions: 2109
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)