Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30510
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.2  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 728 FEGLFLLQNVMSSTLTISNRN 666
           FEG+ +L N++ S++   NRN
Sbjct: 337 FEGIDVLGNIIESSILSPNRN 357


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/30 (23%), Positives = 19/30 (63%)
 Frame = +1

Query: 139 DWQINKTAYLWKDESNFLLSTKFLDWFKSV 228
           D ++NKT  +W   ++ +   ++ +++KS+
Sbjct: 276 DEELNKTKPIWTRNADDISQEEYGEFYKSL 305


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 285 GGVKYVIAHSQSGPAETLIITN 350
           GG    I  +Q+G +E +++T+
Sbjct: 52  GGTTVTITATQTGESEMMVVTS 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,996
Number of Sequences: 336
Number of extensions: 4556
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)