Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30509
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           26   0.18 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.9  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = -1

Query: 368 WNKLTLPATPXCSXKPGMRVPVRLSPCPXTLSRASPCGAALSLWRS--LKSADPMALSTF 195
           W    LP+    S +P   +PV   P P         G++ +   S  + ++ PM ++T 
Sbjct: 67  WQVTPLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEPGSSTTSATSGAVMASPPMPITTD 126

Query: 194 LSLPVRGTFRAAPEVP 147
               + G  R+  + P
Sbjct: 127 NVAAISGVLRSLLDRP 142


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 434  TRPTSTRWAXEWTT 475
            TRPT+T W  + TT
Sbjct: 1072 TRPTTTNWPTQGTT 1085


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 382 DLSAKAFAIRNSPSAIPNAPNFNTLGGG 465
           D+S+      N+PSA  N  NFN    G
Sbjct: 120 DISSTRGNNNNTPSATNNNTNFNNNSNG 147


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 382 DLSAKAFAIRNSPSAIPNAPNFNTLGGG 465
           D+S+      N+PSA  N  NFN    G
Sbjct: 68  DISSTRGNNNNTPSATNNNTNFNNNSNG 95


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 382 DLSAKAFAIRNSPSAIPNAPNFNTLGGG 465
           D+S+      N+PSA  N  NFN    G
Sbjct: 251 DISSTRGNNNNTPSATNNNTNFNNNSNG 278


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 298 SLTGTRIPGFXEXLGVAGKVNLFXN 372
           S  GTRIPG  E   V   + L  N
Sbjct: 168 SADGTRIPGQLEPANVPQMITLTFN 192


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 298 SLTGTRIPGFXEXLGVAGKVNLFXN 372
           S  GTRIPG  E   V   + L  N
Sbjct: 175 SADGTRIPGQLEPANVPQMITLTFN 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.128    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,287
Number of Sequences: 336
Number of extensions: 1478
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)