Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30508
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.0  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   9.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.3  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 85  KIYLMFQKSAVRIKKHSTSTYEK 17
           KI ++   + +R+ KH T+TY K
Sbjct: 328 KISVIQDDAQMRLNKHVTTTYPK 350


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 68  KHQINFIHQANYNMTK*KLKYLNYFIYT 151
           +HQ NFI+++N    K  L  L+  + T
Sbjct: 179 RHQKNFINESNVETVKFNLFLLSQAVET 206


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 644 IDTDKCLNFLNVILNYNK 591
           +D DK LN   V+ NY K
Sbjct: 30  VDVDKILNNDRVLTNYIK 47


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 122 IFIWSCCNLLDG*NLSDVSKISGSYK 45
           + +W C NL       + +KI G+Y+
Sbjct: 235 VAVWMCNNLHKALESRNPAKILGAYR 260


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 122 IFIWSCCNLLDG*NLSDVSKISGSYK 45
           + +W C NL       + +KI G+Y+
Sbjct: 235 VAVWMCNNLHKALESRNPAKILGAYR 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,717
Number of Sequences: 336
Number of extensions: 2922
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)