Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30479
         (373 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q99527 Cluster: Membrane estrogen receptor; n=20; Amnio...    32   3.8  
UniRef50_UPI00015A80B2 Cluster: UPI00015A80B2 related cluster; n...    31   5.0  
UniRef50_Q0U884 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_UPI00006CAA9B Cluster: cation channel family protein; n...    31   6.7  
UniRef50_UPI00006A1D19 Cluster: Zinc finger protein 236.; n=1; X...    31   6.7  
UniRef50_UPI000061855A Cluster: UPI000061855A related cluster; n...    31   8.8  
UniRef50_Q9EMH1 Cluster: AMV235; n=1; Amsacta moorei entomopoxvi...    31   8.8  
UniRef50_Q2S0P7 Cluster: Histidinol-phosphate aminotransferase; ...    31   8.8  
UniRef50_A7T178 Cluster: Predicted protein; n=2; Nematostella ve...    31   8.8  

>UniRef50_Q99527 Cluster: Membrane estrogen receptor; n=20;
           Amniota|Rep: Membrane estrogen receptor - Homo sapiens
           (Human)
          Length = 375

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 265 SFCHSHVIPFHS*YTAAFTNINLHPSYHAFNKTSFPHSAVLHVSLSSELPFYN 107
           SF H+H +  H    AAF+N  L+P  ++F   +F     L++   + LP  N
Sbjct: 297 SFRHAHPLTGHIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALN 349


>UniRef50_UPI00015A80B2 Cluster: UPI00015A80B2 related cluster; n=6;
            Danio rerio|Rep: UPI00015A80B2 UniRef100 entry - Danio
            rerio
          Length = 4728

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 306  PSCSCFVRRRSSICHSVTHTSSPSILDTPLRSQTST 199
            PS +  V   S++ H  T TS+PSIL T  +S TST
Sbjct: 2665 PSTTVLVEGSSTVQHP-TETSAPSILSTTSKSSTST 2699



 Score = 31.5 bits (68), Expect = 5.0
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 306  PSCSCFVRRRSSICHSVTHTSSPSILDTPLRSQTST 199
            PS +  V   S++ H  T TS+PSIL T  +S TST
Sbjct: 3154 PSTTVLVEGSSTVQHP-TETSAPSILSTTSKSSTST 3188



 Score = 31.5 bits (68), Expect = 5.0
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 306  PSCSCFVRRRSSICHSVTHTSSPSILDTPLRSQTST 199
            PS +  V   S++ H  T TS+PSIL T  +S TST
Sbjct: 3654 PSTTVLVEGSSTVQHP-TETSAPSILSTTSKSSTST 3688



 Score = 31.5 bits (68), Expect = 5.0
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 306  PSCSCFVRRRSSICHSVTHTSSPSILDTPLRSQTST 199
            PS +  V   S++ H  T TS+PSIL T  +S TST
Sbjct: 4151 PSTTVLVEGSSTVQHP-TETSAPSILSTTSKSSTST 4185


>UniRef50_Q0U884 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 582

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 16/73 (21%), Positives = 35/73 (47%)
 Frame = -2

Query: 276 SSICHSVTHTSSPSILDTPLRSQTSTCIHHIMRSIKHHSHIRPSCT*VCPQSYLFITLTS 97
           S++  S++H  S          Q     H +   +++HS++      + PQ  ++ +L S
Sbjct: 41  STLTQSISHAKSQYERKAKKGPQIKNRFHAVCEVMQNHSNMLK----ILPQGDMYTSLLS 96

Query: 96  YNIEKVIQKVINH 58
            ++E ++Q  +NH
Sbjct: 97  GSVETIVQASVNH 109


>UniRef50_UPI00006CAA9B Cluster: cation channel family protein; n=1;
            Tetrahymena thermophila SB210|Rep: cation channel family
            protein - Tetrahymena thermophila SB210
          Length = 1970

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = -1

Query: 214  FTNINLHPSYHA--FNKTSFPH---SAVLHVSLSSELPFYNTNILQHRESYTKSYKS 59
            F+N N H   +   F+  ++P    +  +H   SSE+PFYNTN +   ES T S +S
Sbjct: 1565 FSNNNSHIQNNTAYFDSQAYPFQQKAQKIHFDKSSEIPFYNTNEIT-EESSTLSKQS 1620


>UniRef50_UPI00006A1D19 Cluster: Zinc finger protein 236.; n=1;
           Xenopus tropicalis|Rep: Zinc finger protein 236. -
           Xenopus tropicalis
          Length = 474

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -2

Query: 297 SCFVRRRSSICHSVTHTSSPSILDTPLRSQTSTCIHHIMRSIKHHSHIRPSCT*VCPQSY 118
           + F    S   H  TH S       P   +T     H  + +K H +I P+C   CP+S+
Sbjct: 225 AAFTTNGSLTRHMSTHISMKPY-KCPFCDETFRTTVHCKKHMKKHQNIGPACCSFCPKSF 283


>UniRef50_UPI000061855A Cluster: UPI000061855A related cluster; n=1;
           Bos taurus|Rep: UPI000061855A UniRef100 entry - Bos
           Taurus
          Length = 433

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 255 THTSSPSILDTPLRSQTSTCIHHIMRSIKH-HSHIRPSCT 139
           T+T++ + + TP R  T TC+H  M +  H  SH+   CT
Sbjct: 179 TYTNADTHMHTPTRMHTLTCVHTYMDAHTHMRSHLH-GCT 217


>UniRef50_Q9EMH1 Cluster: AMV235; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV235 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 225

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -1

Query: 205 INLHPSYHAFN-KTSFPHSAVLHVSLSSELPFYNTNILQH-RESYTKSY 65
           IN+ P YH FN  T + H ++++    +++ F N+NI  + ++SY  +Y
Sbjct: 180 INIKPKYHIFNGLTQYTHPSIVNY---NDIIFVNSNIYNNKKKSYIINY 225


>UniRef50_Q2S0P7 Cluster: Histidinol-phosphate aminotransferase;
           n=1; Salinibacter ruber DSM 13855|Rep:
           Histidinol-phosphate aminotransferase - Salinibacter
           ruber (strain DSM 13855)
          Length = 354

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 299 ARASFVVVHPSVILSLTRHPLPFLIHRCVHKHQLA 195
           AR  +++ HP+V+  L +  LPF++ R   +  LA
Sbjct: 213 ARLGYLLAHPAVVTELMKARLPFMVDRFAEQTALA 247


>UniRef50_A7T178 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 235

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
 Frame = -1

Query: 271 HLSFCHSHV----IPFHS*YTAAFTNINLHPSYHAFNKTSFPHSAVLHVSLSSELPFYNT 104
           H  + H++      P H+ YT A+T   +HP  H  +  +  H+ + H    S  P Y  
Sbjct: 120 HACYTHAYTPSTPTPTHAEYTHAYTR-RVHPRLHTPSTPTVTHAEITHAYTPSTPPTYTH 178

Query: 103 NI---LQHRESYTKS 68
            +   L H   +T S
Sbjct: 179 RVHTRLLHPRLHTPS 193


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,241,874
Number of Sequences: 1657284
Number of extensions: 5166347
Number of successful extensions: 13370
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13359
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)