Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30479
         (373 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   3.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   3.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   7.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   7.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    20   7.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    20   7.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    20   7.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   9.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   9.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   9.4  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 135 VCPQSYLFITLTSYNIEKVIQKVINHS 55
           + P+SY   T       KV++K++  S
Sbjct: 55  IIPKSYFGTTTNLKRFYKVVEKILTQS 81


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 114 FITLTSYNIEKVIQKVINHS 55
           FI +T+Y  EK+ +  IN++
Sbjct: 175 FIAVTAYQNEKITKLKINYN 194


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +3

Query: 228 QEWKGMTCE*QNDRWMNDDERSTS 299
           Q+W+       N+RW N++  +++
Sbjct: 362 QQWRNNQPSTSNNRWHNNNGNNSN 385


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 249 TSSPSILDTPLRSQTSTCI 193
           TSS S L++P  +  S+C+
Sbjct: 222 TSSSSALESPNPASRSSCL 240


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 197 QVDVCERSGVSRMEGDDV 250
           ++DVC   GV+ +  +DV
Sbjct: 71  KLDVCGNGGVNLLNPEDV 88


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 249 TSSPSILDTPLRSQTSTCI 193
           TSS S L++P  +  S+C+
Sbjct: 11  TSSSSALESPNPASRSSCL 29


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 249 TSSPSILDTPLRSQTSTCI 193
           TSS S L++P  +  S+C+
Sbjct: 11  TSSSSALESPNPASRSSCL 29


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 285 ERSTSTTERLKFILT 329
           E+STSTT+R   + T
Sbjct: 439 EKSTSTTQRTTTVST 453


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 197 QVDVCERSGVSRMEGDDV 250
           ++DVC   GV+ +  +DV
Sbjct: 71  KLDVCGTGGVNLLNPEDV 88


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 249 TSSPSILDTPLRSQTSTCI 193
           TSS S L++P  +  S+C+
Sbjct: 222 TSSSSALESPDPASRSSCL 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,322
Number of Sequences: 336
Number of extensions: 1410
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)