Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30479
         (373 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   3.7  
AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    22   8.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    22   8.5  

>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 199 LHPSYHAFNKTSFPHSAVLHVS 134
           L P YH+ + +S  H   +HV+
Sbjct: 454 LQPRYHSISSSSKLHPTTVHVT 475


>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -2

Query: 222 PLRSQTSTCIHHIMRSIKHHSHIR 151
           PLR++ +  + H+M+ ++ HS +R
Sbjct: 45  PLRNKIAGFVTHLMKRLR-HSQVR 67


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 161 PTFGRPARKSVLRVTF 114
           PTF R  R S++ +TF
Sbjct: 156 PTFNRNKRTSIVDITF 171


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,725
Number of Sequences: 2352
Number of extensions: 6567
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28374390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)