Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30478
(369 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 73 2e-12
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 62 2e-09
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 59 3e-08
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 58 4e-08
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 56 3e-07
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 52 3e-06
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 51 6e-06
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 50 1e-05
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 50 1e-05
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 50 1e-05
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 50 2e-05
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 48 5e-05
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 41 0.008
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 39 0.025
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 35 0.54
UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4; Muri... 33 1.7
UniRef50_Q07GA2 Cluster: Novel protein similar to H1 histone fam... 32 2.9
UniRef50_UPI00015B4D9D Cluster: PREDICTED: similar to ctl2; n=1;... 31 5.1
UniRef50_Q9Y145 Cluster: CG7028-PA; n=4; Diptera|Rep: CG7028-PA ... 31 5.1
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 31 6.7
UniRef50_Q0EXL4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q606I8 Cluster: Putative membrane-bound lytic murein tr... 31 8.9
UniRef50_Q4P2F7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
UniRef50_A6QWQ6 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 8.9
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 72.9 bits (171), Expect = 2e-12
Identities = 33/48 (68%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
Frame = -1
Query: 243 TVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 106
TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG EKAR R++
Sbjct: 131 TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKS 178
Score = 52.8 bits (121), Expect = 2e-06
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPL 252
VP + V AL TE ARARI AGGE LTFDQLALR PL
Sbjct: 91 VPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL 128
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 62.5 bits (145), Expect = 2e-09
Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Frame = -1
Query: 243 TVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRAN 103
TVL+ G R RE RHFG APG P SHTKPYVR+KG E+AR RRA+
Sbjct: 136 TVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERAR-GRRAS 183
Score = 55.2 bits (127), Expect = 4e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAP 255
VPK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P
Sbjct: 95 VPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSP 131
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 58.8 bits (136), Expect = 3e-08
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -2
Query: 368 LVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPLARR 243
+VPK++V AL VTE AR RILA+GGE+LTFDQL R+P R
Sbjct: 93 VVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSR 134
Score = 35.9 bits (79), Expect = 0.24
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 237 LVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 106
L++G AREAV+HF + + KPYVR+KG EKAR R +
Sbjct: 137 LLRGATKAREAVKHF---RNEVKGNPKPYVRSKGRKFEKARGRRHS 179
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 58.4 bits (135), Expect = 4e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -2
Query: 368 LVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPL 252
+VPK++V AL VTE AR RILA+GGE+LTFDQL R+P+
Sbjct: 131 VVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPI 169
Score = 37.1 bits (82), Expect = 0.10
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = -1
Query: 237 LVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 106
L++G+ AREAV+HF + + KPYVR+KG EKAR R +
Sbjct: 175 LLRGETKAREAVKHF---RNEVKGNPKPYVRSKGRKFEKARGRRHS 217
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 55.6 bits (128), Expect = 3e-07
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAP 255
+PK+ + AL VT +ARARI+ AGGEI+TFDQLAL++P
Sbjct: 65 LPKLKICALRVTARARARIIKAGGEIITFDQLALQSP 101
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 52.4 bits (120), Expect = 3e-06
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Frame = -1
Query: 240 VLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 106
+L++G AR A +HFG APG P+S +PYVR+KG EKAR R++
Sbjct: 192 ILLRGPTKARTAEKHFGSAPGRPKSKARPYVRSKGRKFEKARGRRKS 238
Score = 48.0 bits (109), Expect = 5e-05
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = -2
Query: 356 MTVAALHVTEKARARILAAGGEILTFDQLALRAPLAR 246
M V AL TE AR RI+ AGGE LTFDQLALR P +
Sbjct: 153 MKVCALRFTETARKRIVDAGGECLTFDQLALRYPTGK 189
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 51.2 bits (117), Expect = 6e-06
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAP 255
VPK+ V AL TE AR RILAAGG+ LTFDQLA + P
Sbjct: 311 VPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNP 347
Score = 41.5 bits (93), Expect = 0.005
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = -1
Query: 243 TVLVQGQRNAREAVRHFGPAPGAPRSHTKPYV 148
T+L++G + REA++HFG A G P SH KPYV
Sbjct: 352 TILLRGPK-VREALKHFGRAAGLPGSHAKPYV 382
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 50.4 bits (115), Expect = 1e-05
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAP 255
VPK+ V+AL VT AR+RIL A G+IL+FDQLA+ +P
Sbjct: 83 VPKLKVSALRVTSNARSRILKANGKILSFDQLAMTSP 119
Score = 32.3 bits (70), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 231 QGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG 136
+G + + RH G G+P S+ KPYV + G
Sbjct: 120 KGPQKCYQGYRHLGKVSGSPHSYAKPYVGSTG 151
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 50.4 bits (115), Expect = 1e-05
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2
Query: 362 PKMTVAALHVTEKARARILAAGGEILTFDQLALRAP 255
PK TVAAL T ARA+I+ AGGE +T DQLA+RAP
Sbjct: 97 PKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAP 132
Score = 36.7 bits (81), Expect = 0.13
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Frame = -1
Query: 243 TVLVQGQRNAREAVRHFGPAP---GAPR--SHTKPYVRTKGHEKAR 121
T++++G RN+REAVRHFG P APR S + + R +G +++
Sbjct: 137 TLILRGPRNSREAVRHFGMGPHKGKAPRILSTGRKFERARGRRRSK 182
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = -1
Query: 243 TVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHE 130
TVL+ G R RE HF A G P SHTKPYVR+KG +
Sbjct: 172 TVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
Score = 46.8 bits (106), Expect = 1e-04
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAP 255
VPK+ V AL VT +AR+ I+ GG+ LTFDQLAL +P
Sbjct: 131 VPKLKVCALGVTSRARSHIVRVGGKNLTFDQLALDSP 167
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 49.6 bits (113), Expect = 2e-05
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPLARRQY 237
+P M V AL ++ AR I+AAGGE LTFDQLA+ AP + Y
Sbjct: 102 IPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTY 144
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = -1
Query: 243 TVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKARPSR 112
T L++G+++ RE+VRHFG A G P SH+KPY +G E R R
Sbjct: 143 TYLLRGRKSGRESVRHFG-ASGVPGSHSKPYATNRGKETKRGRR 185
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 48.0 bits (109), Expect = 5e-05
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPLARR 243
VPKM V AL T+ A A I AGG+ L FD+LAL+AP R+
Sbjct: 92 VPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRK 132
Score = 33.1 bits (72), Expect = 1.7
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -1
Query: 243 TVLVQGQRNAREAVRHFG 190
TVL++G+RN REA++HFG
Sbjct: 133 TVLIRGKRNVREALKHFG 150
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 40.7 bits (91), Expect = 0.008
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = -2
Query: 356 MTVAALHV-TEKARARILAAGGEILTFDQLALRAP 255
+TV + V TE AR RILAAGG+ LTFDQLA + P
Sbjct: 389 LTVPKIKVFTETARKRILAAGGKTLTFDQLAQQNP 423
Score = 40.7 bits (91), Expect = 0.008
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -1
Query: 243 TVLVQGQRNAREAVRHFGPAPGAPRSHTKPYV 148
T+L++G R RE ++HFG A G P SH KPYV
Sbjct: 428 TILLRGPR-VREELKHFGRAAGLPGSHAKPYV 458
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 39.1 bits (87), Expect = 0.025
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1
Query: 240 VLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKAR 121
VL+QG+R+ R + FG +PG P SH KP KG AR
Sbjct: 136 VLLQGRRSCRAVCKKFG-SPGRPNSHVKPKGEHKGRRGAR 174
Score = 38.3 bits (85), Expect = 0.044
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2
Query: 365 VPKMTVAALHVTEKARARILAAGGEILTFDQLALRAP 255
+P+MT+ AL + AR+RI AGG ++FD+L P
Sbjct: 94 IPRMTICALKFSATARSRIEKAGGRCMSFDELLAEKP 130
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 34.7 bits (76), Expect = 0.54
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -2
Query: 359 KMTVAALHVTEKARARILAAGGEILTFDQLALRAP 255
K+ VAA+ ++ KA +++ AGGE+LT +L + P
Sbjct: 79 KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYP 113
>UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4;
Murinae|Rep: Nuclear transition protein 2 - Mus musculus
(Mouse)
Length = 117
Score = 33.1 bits (72), Expect = 1.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 189 PAPGAPRSHTKPYVRTKGHEKARPSRRAN 103
P+PG P H KP V ++ H ARPS R +
Sbjct: 53 PSPGPPMKHPKPSVHSR-HSPARPSHRGS 80
>UniRef50_Q07GA2 Cluster: Novel protein similar to H1 histone
family, member X h1fx; n=2; Xenopus tropicalis|Rep:
Novel protein similar to H1 histone family, member X
h1fx - Xenopus tropicalis (Western clawed frog)
(Silurana tropicalis)
Length = 212
Score = 32.3 bits (70), Expect = 2.9
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -1
Query: 234 VQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKARPSR 112
+QG++ A R AP APR HTK + KGH KA P +
Sbjct: 115 MQGRKKPSVAKRPVSKAPRAPRGHTKSH--AKGH-KASPKK 152
>UniRef50_UPI00015B4D9D Cluster: PREDICTED: similar to ctl2; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to ctl2 -
Nasonia vitripennis
Length = 662
Score = 31.5 bits (68), Expect = 5.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 290 ILTFDQLALRAPLARRQYWYKVSEMLVRQCVTLALLQEHRALTLN 156
I TFDQ+ L R WY S+ L + C+ + + H+ TLN
Sbjct: 140 IKTFDQVDQLVALERCAKWYLESDHLYKYCLPTKVWEGHQKETLN 184
>UniRef50_Q9Y145 Cluster: CG7028-PA; n=4; Diptera|Rep: CG7028-PA -
Drosophila melanogaster (Fruit fly)
Length = 907
Score = 31.5 bits (68), Expect = 5.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 201 RHFGPAPGAPRSHTKPYVRTKGHEKARPSRRAN 103
RH P P APRS + R++ +++ P RRA+
Sbjct: 269 RHASPLPAAPRSRCRRDRRSRDRDRSPPRRRAS 301
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 31.1 bits (67), Expect = 6.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 270 QLIKSKNFSSSSQNACTSFFGNMKSSHRHL 359
+L KS +F +S+N T+ FGNMK S ++
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYI 249
>UniRef50_Q0EXL4 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 341
Score = 31.1 bits (67), Expect = 6.7
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = +2
Query: 200 RTASRAFR*PCTSTVFLPAEHEEPADQK*EFLLQQPKCVHELFR*HEEQPPSS 358
R ASR+ TS LPA+H+ AD+K E QQP E EQ PSS
Sbjct: 109 RPASRSVA--TTSAPILPADHD--ADEKQESTAQQPVVTPETQMAASEQQPSS 157
>UniRef50_Q606I8 Cluster: Putative membrane-bound lytic murein
transglycosylase; n=1; Methylococcus capsulatus|Rep:
Putative membrane-bound lytic murein transglycosylase -
Methylococcus capsulatus
Length = 562
Score = 30.7 bits (66), Expect = 8.9
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -1
Query: 228 GQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKARPSRRA 106
G R + E APG RS KP V G E A PSR A
Sbjct: 350 GHRGSLETATEDDAAPGRERSVRKPVVSGYGAEYAVPSRSA 390
>UniRef50_Q4P2F7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1879
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 228 GQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKARPSRRAN 103
G R+AR +RH G R P+ T E RP+R A+
Sbjct: 9 GHRSARPGIRHRFRDQGPDRKGRDPHTLTSNREGGRPARLAS 50
>UniRef50_A6QWQ6 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 397
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 216 HFADLVPVLSSCQRSTKSQLIKSKNFSSSSQNACTSF 326
HFA +VP +SS S K + + S+N SS N F
Sbjct: 87 HFAVVVPSISSSDTSNKKRRLSSENHLSSPVNGVLGF 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,527,630
Number of Sequences: 1657284
Number of extensions: 5693997
Number of successful extensions: 18321
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 17788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18312
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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