Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30477
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -1

Query: 578 NSPNLVSPSTSPVVRKATPSGFRRRSPGSLAGSPAW 471
           N PN  +PSTS  V++       R S  + A    W
Sbjct: 32  NVPNFAAPSTSTAVQRPQAILQVRPSTSAAADVDGW 67


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 458 DPITPRPETLPMNQGCGGGTLT 523
           +P  P P  L   +GC  G  T
Sbjct: 125 EPFRPHPHNLVGREGCKKGVCT 146


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 428 CLAPDQRPPTDPI 466
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 428 CLAPDQRPPTDPI 466
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 558 AVHVARGPEGNAVRVPPPQP 499
           A+H   G   N +  P PQP
Sbjct: 377 AIHQTLGGSSNEIVEPVPQP 396


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 314  CVNYYLCN 337
            C  YYLCN
Sbjct: 2249 CAQYYLCN 2256


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 300 PSEVWHERSSFVETPAPGSMEPCQR 226
           P  V+H +S+  + P     E C++
Sbjct: 506 PGTVFHTQSNICDWPEHADREKCKK 530


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,707
Number of Sequences: 336
Number of extensions: 3257
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)