Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30477
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 33 0.15
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 33 0.20
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 32 0.35
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 32 0.35
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.61
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.61
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 31 0.61
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 31 0.80
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 30 1.4
AF038613-12|AAB92046.3| 328|Caenorhabditis elegans Hypothetical... 29 2.4
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 29 3.2
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 29 3.2
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 29 3.2
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 29 3.2
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 29 3.2
AY390553-1|AAQ94965.1| 239|Caenorhabditis elegans SMA-9 protein. 29 3.2
AY390541-1|AAQ94953.1| 521|Caenorhabditis elegans SMA-9 class I... 29 3.2
AY390540-1|AAQ94952.1| 405|Caenorhabditis elegans SMA-9 class I... 29 3.2
AY390539-1|AAQ94951.1| 465|Caenorhabditis elegans SMA-9 class I... 29 3.2
AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class I... 29 3.2
AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical... 29 3.2
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 4.3
AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein. 28 5.7
AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and cap... 28 5.7
AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle defec... 28 5.7
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 7.5
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 7.5
AC024214-5|AAF36077.2| 605|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024214-4|AAM97985.2| 603|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 28 7.5
AF067949-4|AAC19237.1| 415|Caenorhabditis elegans Hypothetical ... 27 9.9
AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical... 27 9.9
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.15
Identities = 28/96 (29%), Positives = 44/96 (45%)
Frame = +3
Query: 198 QLQPVTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEPTS 377
++ P+ V + AP+T A + + ARP T+ G A+ R P + + +
Sbjct: 327 RVTPIAPNVVRNGAPTTAQQAPRKPIGI-ARPQTSS-GIAAPGAPRSRIAMPTTSSSSLA 384
Query: 378 SI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGRRP 485
SA + V R T A + + R + PSRPG RP
Sbjct: 385 RRPGSASSSVPRVPTGAASMTSSSRIRPPSRPGSRP 420
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = +3
Query: 183 SEPPTQLQPVTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSL 362
+E PT + VT A +T + T + T K + + T RP T +
Sbjct: 269 TEAPTTTEEVTTTETTIEAQTTTTTERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTVATT 328
Query: 363 TEPTSSI*ESAVARVHRT 416
PT++ E R RT
Sbjct: 329 EAPTTTTVEDVTTRAPRT 346
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Frame = +3
Query: 186 EPPTQLQPVTQPS-----VADRAPSTL--VLASLRTMTFRARPPTAKKGSASTITCAMRP 344
+P +Q + QP+ V ++P T V+ + +T +A PTA SAST A P
Sbjct: 1488 QPVQSVQSLPQPAEIPRVVVPQSPGTPQPVVPQVSIVTPQAPQPTAAATSASTGPIAPEP 1547
Query: 345 ITPLSLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSR 470
T T T+ + S + +PT + + R
Sbjct: 1548 TTAAPTTTETTPLPPSLAPHPPAAHAAKTVIPTYKAEPVLGR 1589
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 189 PPTQLQPVT---QPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLS 359
PPT T +PS PST ++ T T +P T+ S ST T T +
Sbjct: 584 PPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATT 643
Query: 360 LTEPTSS 380
+PT++
Sbjct: 644 TPQPTTT 650
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 189 PPTQLQPVT---QPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLS 359
PPT T +PS PST ++ T T +P T+ S ST T T +
Sbjct: 584 PPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATT 643
Query: 360 LTEPTSS 380
+PT++
Sbjct: 644 TPQPTTT 650
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +3
Query: 189 PPTQLQ-PVTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPIT----P 353
P TQ PVT+P+V PS+ + T ++PP +T+T P+T P
Sbjct: 533 PTTQTTAPVTKPTV----PSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVP 588
Query: 354 LSLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGRRP 485
S T PT+ V T+TS + T P+ P + P
Sbjct: 589 SSATVPTT---PPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLP 629
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +3
Query: 189 PPTQLQ-PVTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPIT----P 353
P TQ PVT+P+V PS+ + T ++PP +T+T P+T P
Sbjct: 589 PTTQTTAPVTKPTV----PSSTTQTAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVP 644
Query: 354 LSLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRPGRRP 485
S T PT+ V T+TS + T P+ P + P
Sbjct: 645 SSATVPTT---PPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLP 685
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 0.61
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = +3
Query: 189 PP--TQLQPVTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPIT-PLS 359
PP T T +V AP+T V S T P TA+ S +T+T +T P +
Sbjct: 229 PPVTTSTMATTTANVTSAAPNTTVTISTSPTTVVTVPSTAQTSSTTTVTVPTTTVTGPTT 288
Query: 360 -LTEPTS--SI*ESAVARVHRTSTSAVWLPT 443
+T PT+ +I + V T ++ V +P+
Sbjct: 289 VVTVPTTVVTIPSTVVTSPITTPSTVVTVPS 319
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 210 VTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEPTS 377
VT PS APST+V MT R+ T S+ + A + ++T TS
Sbjct: 392 VTNPSTVVTAPSTVVTVPTTVMTSRSTVITTPTTGGSSPSTAGTSLASTAVTTETS 447
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 31.1 bits (67), Expect = 0.80
Identities = 28/85 (32%), Positives = 37/85 (43%)
Frame = +3
Query: 189 PPTQLQPVTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTE 368
PPT P+ + S + P + S T T TAKK + +PIT + LT
Sbjct: 499 PPTTA-PLPEISETTQKPEPTTVQSTTTYTTAIPRRTAKKQFFTR-----KPIT-IPLTP 551
Query: 369 PTSSI*ESAVARVHRTSTSAVWLPT 443
TSS + V T+ S WLPT
Sbjct: 552 LTSSSTTTESTTVSSTTQSTTWLPT 576
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 4/104 (3%)
Frame = +3
Query: 168 SDLHISEPPTQLQPVTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTIT----CA 335
+D ++ P + P T SV PSTLVL+S T + T +T T +
Sbjct: 33 ADCRANQTPHTMLPSTLTSVDMETPSTLVLSSTPTSSSTPIKETTTTAPETTSTEPPSSS 92
Query: 336 MRPITPLSLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPS 467
P+ + T P ++ E+ + T+ P + PS
Sbjct: 93 TTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPS 136
>AF038613-12|AAB92046.3| 328|Caenorhabditis elegans Hypothetical
protein F42A6.1 protein.
Length = 328
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 137 MFCAHADARKPMSRSLYIFGYYSQNITLTISNSQCS 30
++C +DAR R + S +TLT+S S+C+
Sbjct: 25 LWCILSDARNRNRREFLLVASQSVTVTLTVSTSECA 60
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 1852 SSITSPIVSSSTNFSYRKRSESSLSGS 1878
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 1834 SSITSPIVSSSTNFSYRKRSESSLSGS 1860
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 1887 SSITSPIVSSSTNFSYRKRSESSLSGS 1913
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 1920 SSITSPIVSSSTNFSYRKRSESSLSGS 1946
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 1478 SSITSPIVSSSTNFSYRKRSESSLSGS 1504
>AY390553-1|AAQ94965.1| 239|Caenorhabditis elegans SMA-9 protein.
Length = 239
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 25 SSITSPIVSSSTNFSYRKRSESSLSGS 51
>AY390541-1|AAQ94953.1| 521|Caenorhabditis elegans SMA-9 class Ib
protein.
Length = 521
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 307 SSITSPIVSSSTNFSYRKRSESSLSGS 333
>AY390540-1|AAQ94952.1| 405|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 405
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 191 SSITSPIVSSSTNFSYRKRSESSLSGS 217
>AY390539-1|AAQ94951.1| 465|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 465
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 251 SSITSPIVSSSTNFSYRKRSESSLSGS 277
>AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 591
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 560 SPSTSPVVRKATPSGFRRRSPGSLAGS 480
S TSP+V +T +R+RS SL+GS
Sbjct: 377 SSITSPIVSSSTNFSYRKRSESSLSGS 403
>AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical
protein Y17G7B.19 protein.
Length = 272
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 332 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRP 451
C + ++I + G ++ + GPCS++ID C PD+ P
Sbjct: 101 CYSKKSSICSTGGTPFEVELSDGPCSNHID-C--NPDELP 137
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +3
Query: 177 HISEPPTQLQPVTQPSVADRAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPL 356
H S T+++ +PS A P T ++ R + RARPP+A + T RP T +
Sbjct: 43 HASTTNTRME---RPSTASSRPRT---STGRAPSARARPPSAMRAPPPQPTYENRPTTGM 96
Query: 357 SL 362
S+
Sbjct: 97 SM 98
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +3
Query: 240 PSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEPTSSI*ESAVARVHRTS 419
PST + S T T +P + AST +T S TS + S+ R T+
Sbjct: 295 PSTSTVPSTTTSTTTPKPSSPSTAEASTTPVLTSNLT--SALTSTSPLLASSTERTATTA 352
Query: 420 TSAVWLP 440
TS+V P
Sbjct: 353 TSSVSTP 359
>AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein.
Length = 529
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 578 NSPNLVSPSTSPVVRKATPSGFRRRSPGSLAGS 480
+SP PSTS R TP R +P S+A S
Sbjct: 481 SSPKDTQPSTSSSSRTTTPMSKRAMTPSSIASS 513
>AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 2 protein.
Length = 900
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 467 TPRPETLPMNQGCGGG 514
TPRP T MN+G GGG
Sbjct: 873 TPRPHTQYMNRGAGGG 888
>AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle
defective protein 1 protein.
Length = 529
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 578 NSPNLVSPSTSPVVRKATPSGFRRRSPGSLAGS 480
+SP PSTS R TP R +P S+A S
Sbjct: 481 SSPKDTQPSTSSSSRTTTPMSKRAMTPSSIASS 513
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 219 PSVADRAPSTLVLASLRTMT--FRARPPTAKKGSASTITCAMRPITPLSLTEPTSSI*ES 392
PS + + + + RT T P T S ST+T + T S T PT+++ +
Sbjct: 222 PSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTV-VT 280
Query: 393 AVARVHRTSTS 425
V TSTS
Sbjct: 281 TVPTTTATSTS 291
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 219 PSVADRAPSTLVLASLRTMT--FRARPPTAKKGSASTITCAMRPITPLSLTEPTSSI*ES 392
PS + + + + RT T P T S ST+T + T S T PT+++ +
Sbjct: 204 PSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTV-VT 262
Query: 393 AVARVHRTSTS 425
V TSTS
Sbjct: 263 TVPTTTATSTS 273
>AC024214-5|AAF36077.2| 605|Caenorhabditis elegans Hypothetical
protein Y77E11A.7a protein.
Length = 605
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 234 RAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEPTS 377
R PS +LA+ + F PTA+ STI+ M + + EP S
Sbjct: 7 RTPSAKLLAAKQDEVFEKVIPTAQLTPKSTISAQMAKVPESTTPEPLS 54
>AC024214-4|AAM97985.2| 603|Caenorhabditis elegans Hypothetical
protein Y77E11A.7b protein.
Length = 603
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 234 RAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEPTS 377
R PS +LA+ + F PTA+ STI+ M + + EP S
Sbjct: 7 RTPSAKLLAAKQDEVFEKVIPTAQLTPKSTISAQMAKVPESTTPEPLS 54
>AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical
protein Y77E11A.7c protein.
Length = 577
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 234 RAPSTLVLASLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEPTS 377
R PS +LA+ + F PTA+ STI+ M + + EP S
Sbjct: 7 RTPSAKLLAAKQDEVFEKVIPTAQLTPKSTISAQMAKVPESTTPEPLS 54
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 3/100 (3%)
Frame = +3
Query: 183 SEPPTQLQPVTQPSVADRAPSTLVLASLRTMTFRAR---PPTAKKGSASTITCAMRPITP 353
++PP P T P P +V +T A P T +T T +T
Sbjct: 283 TDPPEATAPATDPPTT-MIPPAVVTTEANIITTEATAIIPKTVPPAVITTETTPAEVVTE 341
Query: 354 LSLTEPTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRP 473
L T + E+ A A PT+ + +PS P
Sbjct: 342 LLETTTAPAPAEALTAAPAPVKEPATPEPTKTQAPVPSEP 381
>AF067949-4|AAC19237.1| 415|Caenorhabditis elegans Hypothetical
protein T10H9.3 protein.
Length = 415
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 672 QRASPYVNVQLLSFGLVVIDWFN 604
QRA ++ +LSF L+ IDW+N
Sbjct: 392 QRAFLLFSIVVLSFALLFIDWYN 414
>AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical
protein H20J04.1 protein.
Length = 843
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 82 KMYKLLLIGFLASACAQNMDTGDLESIINQIFTSANPRRNCSRSRSL 222
K +KLL IGFL C N+ T ++ T A R+ SL
Sbjct: 2 KYWKLLFIGFLIVNCHDNIPTSLTAQFVSGNATGAIVTRSAPEDSSL 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,358,071
Number of Sequences: 27780
Number of extensions: 336832
Number of successful extensions: 1308
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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