Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30475
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    26   0.30 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.5  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -2

Query: 159 GHEPEMYEIPEPLVEHAGARAPPRQACTVSSAGG 58
           G E E    P P V  AG  A  R A     AGG
Sbjct: 268 GGEEEAERAPAPAVRAAGDAAAARGAARADGAGG 301


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 164  NPESCICTRTSGYSCQGRRTLTRRL*IP 247
            NPE  +C       C GR+ L ++  +P
Sbjct: 1241 NPEEHMCDWKYKVKCVGRKQLAQKYQLP 1268


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 438 GVAFELRSFTYAPDNPRYSP 497
           G+ F  R+FT +  N  Y+P
Sbjct: 265 GIPFYGRTFTLSNSNTNYNP 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,963
Number of Sequences: 336
Number of extensions: 2545
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)