Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30475
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023815-2|CAD92383.1|  146|Caenorhabditis elegans Hypothetical ...    29   2.1  
U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-li...    29   3.7  

>AL023815-2|CAD92383.1|  146|Caenorhabditis elegans Hypothetical
           protein H28O16.1b protein.
          Length = 146

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 158 PQNPESCICTRTSGYSCQGRR 220
           P+N  + +C RT+GY  QGRR
Sbjct: 116 PRNHPTFVCARTNGYWSQGRR 136


>U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-like
           protein protein16 protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 93  AEPAHQHALQVAPVSHTSQVHDLKIRKAVFAHGHPDTR-VKEGG 221
           AE  H+H  +   V H +++H+ + R      GHP+   VK  G
Sbjct: 173 AEDHHEHQKRSEHVEHQAEMHEHQKRSTQEVSGHPEHHLVKRSG 216


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,154,595
Number of Sequences: 27780
Number of extensions: 259577
Number of successful extensions: 899
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)