Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30473
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 168 2e-41
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 168 2e-41
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 168 2e-41
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 168 2e-41
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 168 2e-41
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 168 2e-41
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 168 2e-41
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 168 2e-41
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 168 2e-41
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 131 2e-30
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 33 1.1
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 33 1.1
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 33 1.1
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 33 1.1
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 31 4.3
AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor ... 31 4.3
BC034696-1|AAH34696.1| 294|Homo sapiens syntaxin 19 protein. 30 7.4
AF461456-1|AAQ04780.1| 294|Homo sapiens syntaxin 19 protein. 30 7.4
X97065-1|CAA65775.1| 767|Homo sapiens Sec23 protein protein. 30 9.8
BC095404-1|AAH95404.1| 767|Homo sapiens Sec23 homolog B (S. cer... 30 9.8
BC005404-1|AAH05404.1| 767|Homo sapiens SEC23B protein protein. 30 9.8
BC005032-1|AAH05032.1| 767|Homo sapiens Sec23 homolog B (S. cer... 30 9.8
AL121900-3|CAH73149.1| 767|Homo sapiens Sec23 homolog B (S. cer... 30 9.8
AL121893-9|CAI12513.1| 331|Homo sapiens Sec23 homolog B (S. cer... 30 9.8
AL121893-8|CAI12512.1| 767|Homo sapiens Sec23 homolog B (S. cer... 30 9.8
AK125574-1|BAC86208.1| 387|Homo sapiens protein ( Homo sapiens ... 30 9.8
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 168 bits (409), Expect = 2e-41
Identities = 77/112 (68%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 85 GQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 144
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 145 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 139 bits (337), Expect = 8e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 7 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 187 VHFRDPYKFKTRKELFIAPEG 249
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 197 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 168 bits (409), Expect = 2e-41
Identities = 77/112 (68%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 85 GQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 144
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 145 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 139 bits (337), Expect = 8e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 7 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 187 VHFRDPYKFKTRKELFIAPEG 249
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 197 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 168 bits (409), Expect = 2e-41
Identities = 77/112 (68%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 85 GQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 144
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 145 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 139 bits (337), Expect = 8e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 7 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 187 VHFRDPYKFKTRKELFIAPEG 249
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 197 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 168 bits (408), Expect = 2e-41
Identities = 76/112 (67%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 85 GQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 144
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 145 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 139 bits (337), Expect = 8e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 7 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 187 VHFRDPYKFKTRKELFIAPEG 249
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 197 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 168 bits (408), Expect = 2e-41
Identities = 76/112 (67%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 85 GQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 144
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 145 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 139 bits (337), Expect = 8e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 7 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 187 VHFRDPYKFKTRKELFIAPEG 249
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 197 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 168 bits (408), Expect = 2e-41
Identities = 76/112 (67%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 85 GQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 144
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 145 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 139 bits (337), Expect = 8e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 7 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 187 VHFRDPYKFKTRKELFIAPEG 249
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 197 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 168 bits (408), Expect = 2e-41
Identities = 76/112 (67%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 85 GQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 144
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 145 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 139 bits (337), Expect = 8e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 7 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 187 VHFRDPYKFKTRKELFIAPEG 249
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 197 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 168 bits (408), Expect = 2e-41
Identities = 76/112 (67%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 39 GQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 98
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 99 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 150
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 151 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 192
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = +1
Query: 145 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 249
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 35
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 168 bits (408), Expect = 2e-41
Identities = 76/112 (67%), Positives = 89/112 (79%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
GQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K
Sbjct: 85 GQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETK 144
Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
+TRVKLPSG+KKV+ S+NR +VG++ + K AYHKYK KRNCW
Sbjct: 145 KTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCW 196
Score = 139 bits (337), Expect = 8e-33
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 7 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 187 VHFRDPYKFKTRKELFIAPEG 249
V FRDPY+FK R ELFIA EG
Sbjct: 61 VVFRDPYRFKKRTELFIAAEG 81
Score = 76.6 bits (180), Expect = 9e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
P VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGL+
Sbjct: 197 PRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 131 bits (317), Expect = 2e-30
Identities = 60/77 (77%), Positives = 67/77 (87%)
Frame = +1
Query: 19 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 198
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 199 DPYKFKTRKELFIAPEG 249
DPY+FK R ELFIA EG
Sbjct: 61 DPYRFKKRTELFIAAEG 77
Score = 93.5 bits (222), Expect = 7e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 406
GQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 81 GQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 299 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 415
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 299 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 415
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 299 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 415
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 214
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 299 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 415
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 254 VEPSGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 129
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor
alpha 2 isoform protein.
Length = 54
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 254 VEPSGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 129
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>BC034696-1|AAH34696.1| 294|Homo sapiens syntaxin 19 protein.
Length = 294
Score = 30.3 bits (65), Expect = 7.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 566 KYKVKRNCWAICTWCCHEPCRAS 634
KYK + C +C WCC PC +S
Sbjct: 273 KYKKRNPCRVLCCWCC--PCCSS 293
>AF461456-1|AAQ04780.1| 294|Homo sapiens syntaxin 19 protein.
Length = 294
Score = 30.3 bits (65), Expect = 7.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 566 KYKVKRNCWAICTWCCHEPCRAS 634
KYK + C +C WCC PC +S
Sbjct: 273 KYKKRNPCRVLCCWCC--PCCSS 293
>X97065-1|CAA65775.1| 767|Homo sapiens Sec23 protein protein.
Length = 767
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 599 IWPSSYV*PCTCGMPLPAFKIGLSIRP--PPAKYRPCLC 489
+WPSS + +PL L RP PP +Y P LC
Sbjct: 23 VWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLC 61
>BC095404-1|AAH95404.1| 767|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 767
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 599 IWPSSYV*PCTCGMPLPAFKIGLSIRP--PPAKYRPCLC 489
+WPSS + +PL L RP PP +Y P LC
Sbjct: 23 VWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLC 61
>BC005404-1|AAH05404.1| 767|Homo sapiens SEC23B protein protein.
Length = 767
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 599 IWPSSYV*PCTCGMPLPAFKIGLSIRP--PPAKYRPCLC 489
+WPSS + +PL L RP PP +Y P LC
Sbjct: 23 VWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLC 61
>BC005032-1|AAH05032.1| 767|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 767
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 599 IWPSSYV*PCTCGMPLPAFKIGLSIRP--PPAKYRPCLC 489
+WPSS + +PL L RP PP +Y P LC
Sbjct: 23 VWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLC 61
>AL121900-3|CAH73149.1| 767|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 767
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 599 IWPSSYV*PCTCGMPLPAFKIGLSIRP--PPAKYRPCLC 489
+WPSS + +PL L RP PP +Y P LC
Sbjct: 23 VWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLC 61
>AL121893-9|CAI12513.1| 331|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 331
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 599 IWPSSYV*PCTCGMPLPAFKIGLSIRP--PPAKYRPCLC 489
+WPSS + +PL L RP PP +Y P LC
Sbjct: 23 VWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLC 61
>AL121893-8|CAI12512.1| 767|Homo sapiens Sec23 homolog B (S.
cerevisiae) protein.
Length = 767
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 599 IWPSSYV*PCTCGMPLPAFKIGLSIRP--PPAKYRPCLC 489
+WPSS + +PL L RP PP +Y P LC
Sbjct: 23 VWPSSRLEATRMVVPLACLLTPLKERPDLPPVQYEPVLC 61
>AK125574-1|BAC86208.1| 387|Homo sapiens protein ( Homo sapiens
cDNA FLJ43586 fis, clone SKNMC2007504. ).
Length = 387
Score = 29.9 bits (64), Expect = 9.8
Identities = 24/85 (28%), Positives = 37/85 (43%)
Frame = -2
Query: 567 LWYAPSSFQNRFVNTSTSSKIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEA 388
L ++P + ++ V+ S S I T L T +P S TL++ + PI+ P A
Sbjct: 147 LMFSPPALRDSSVSLSYSPAISTSHLGSASHTQESPTNSRTLLQPS----PISFTSSPPA 202
Query: 387 RARRPLSPIFSSRLHTMVPSGIAPT 313
P+SP FS +P T
Sbjct: 203 FRDSPVSPSFSPAFPRFLPQSAPGT 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,141,982
Number of Sequences: 237096
Number of extensions: 3112112
Number of successful extensions: 6490
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6472
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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