Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30473
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   151   7e-37
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    39   0.003
Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical p...    28   7.8  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  151 bits (365), Expect = 7e-37
 Identities = 64/112 (57%), Positives = 84/112 (75%)
 Frame = +2

Query: 257 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 436
           GQF++CG KA +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNPD K
Sbjct: 85  GQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTK 144

Query: 437 RTRVKLPSGAKKVLPSSNRGMVGILLEVDVLTNLF*KLEGAYHKYKVKRNCW 592
           +TR++LPSGAKKV+ S NR M+G++           K   +YHKYK KRN W
Sbjct: 145 KTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSW 196



 Score =  134 bits (324), Expect = 6e-32
 Identities = 61/81 (75%), Positives = 67/81 (82%)
 Frame = +1

Query: 7   MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 186
           MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1   MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60

Query: 187 VHFRDPYKFKTRKELFIAPEG 249
           + FRDPYK+KT K   +A EG
Sbjct: 61  IAFRDPYKYKTVKTTVVAAEG 81



 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 594 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLM 719
           P VRGVAMNPVEHPHGGGNHQHIG  STV+R  SAG+KVGL+
Sbjct: 197 PRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLI 238


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = +2

Query: 299 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 475
           GN  P+G++  GT++ ++E     D     +A+G  AT++ H  D   T VKLP   +  
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217

Query: 476 LPSSNRGMVGILLEVDVLTNLF 541
           L  +    VG L   D+   +F
Sbjct: 218 LHRTCMATVGRLSHADIDGKIF 239


>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +2

Query: 413 IGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGILLE 517
           IGH  D +RTR  LP+G KKVL  + + +  +L++
Sbjct: 57  IGHGSD-RRTRFVLPNGYKKVLVQNVKDLDMLLMQ 90


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 7   MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 117
           +GR  R+ +KG    F +HT   K    L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 118 HGYIKGVVKDIIHDPGRGAPLAVVHFR 198
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 118 HGYIKGVVKDIIHDPGRGAPLAVVHFR 198
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical
           protein Y57G11C.44 protein.
          Length = 155

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +1

Query: 55  VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 180
           +S  ++RK +     LD+++  G  K ++KDI +D  +  P+
Sbjct: 1   MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,647,659
Number of Sequences: 27780
Number of extensions: 439671
Number of successful extensions: 1119
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)