Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30469
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 189 6e-47
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 107 2e-22
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 90 4e-17
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 86 6e-16
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 83 4e-15
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 81 2e-14
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 81 3e-14
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 79 1e-13
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 75 2e-12
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 75 2e-12
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 74 4e-12
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 74 4e-12
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 73 5e-12
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 72 1e-11
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 71 3e-11
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 69 8e-11
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 69 1e-10
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 67 3e-10
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 67 4e-10
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 62 1e-08
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 62 2e-08
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 56 6e-07
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 50 5e-05
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 48 3e-04
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 43 0.006
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 42 0.010
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 42 0.014
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.024
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.055
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.072
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 36 1.2
UniRef50_Q9VHM8 Cluster: CG8136-PB, isoform B; n=3; Drosophila m... 35 2.1
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 3.6
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 34 3.6
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 34 3.6
UniRef50_Q05TS7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_A4HH69 Cluster: ABC transporter, putative; n=3; Leishma... 33 6.3
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 189 bits (460), Expect = 6e-47
Identities = 98/146 (67%), Positives = 108/146 (73%)
Frame = +1
Query: 73 RNYDLGNGVXXFLQIQDVPQXG*IQVHWQKEP*A*EAQXADCCCKADWR*EEWGNQNSTP 252
RNYDLGNGV F + + + + +K P + + K + G +
Sbjct: 30 RNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPL 89
Query: 253 QRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 432
+RRKSFYPTQEKI ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG
Sbjct: 90 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 149
Query: 433 LLLVTGPFAFNSCPLRRIPQRYVIGT 510
LLLVTGPFAFNSCPLRRIPQRYVIGT
Sbjct: 150 LLLVTGPFAFNSCPLRRIPQRYVIGT 175
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/54 (74%), Positives = 40/54 (74%)
Frame = +3
Query: 510 STRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRK 671
STRISLGNFKLPKHFNDDYF EGDDIFATKKEKYVPSEQRK
Sbjct: 176 STRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRK 229
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 107 bits (257), Expect = 2e-22
Identities = 53/86 (61%), Positives = 62/86 (72%)
Frame = +1
Query: 253 QRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 432
++ K+ YPT+ + FS+H R R NL GTV ILLAGRH GKRVVL+ +L SG
Sbjct: 82 KKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASG 141
Query: 433 LLLVTGPFAFNSCPLRRIPQRYVIGT 510
LLLVTGPFA NSCPLRR+ QRYVIGT
Sbjct: 142 LLLVTGPFALNSCPLRRVSQRYVIGT 167
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +3
Query: 510 STRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRK 671
S+++ LG FK+P+H ND YF DIFA KKE++VP+EQRK
Sbjct: 168 SSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA---DIFAAKKERFVPNEQRK 218
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = +1
Query: 268 FYPTQE--KICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLL 441
+YPT++ + S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLL
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 442 VTGPFAFNSCPLRRIPQRYVIGT 510
VTGP N PLRR Q++VI T
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIAT 197
Score = 41.9 bits (94), Expect = 0.014
Identities = 24/54 (44%), Positives = 30/54 (55%)
Frame = +3
Query: 510 STRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRK 671
ST+I + N K+PKH D YF EG +IF T+KEKY +EQRK
Sbjct: 198 STKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRK 247
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 86.2 bits (204), Expect = 6e-16
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +1
Query: 316 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 495
FS HVR+IR +++ GTV ILLAG H GKRV+ + L SGLLLVTGPF +N PLRR+ Q
Sbjct: 80 FSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQC 139
Query: 496 YVIGT 510
YVI T
Sbjct: 140 YVIAT 144
Score = 36.7 bits (81), Expect = 0.51
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 453 FCFQFVPATPYSSALCDRHSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 632
F + VP + STRI + F +PKH +D+YF + +F+
Sbjct: 126 FKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF----RRVDLKESKTDAGKLFS 181
Query: 633 TKKEKYVPSEQRK 671
T+ +KY S+ RK
Sbjct: 182 TETKKYTVSDIRK 194
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 83.4 bits (197), Expect = 4e-15
Identities = 41/65 (63%), Positives = 47/65 (72%)
Frame = +1
Query: 316 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 495
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 496 YVIGT 510
YVI T
Sbjct: 146 YVIAT 150
Score = 34.3 bits (75), Expect = 2.7
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +3
Query: 453 FCFQFVPATPYSSALCDRHSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 632
F + VP + TRI + N K+P ND++F D IFA
Sbjct: 132 FKYNGVPLRRVNQRYVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFA 186
Query: 633 TKKEKYVPSEQRK 671
+++KY S+ RK
Sbjct: 187 EEEKKYTVSDDRK 199
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +1
Query: 232 GNQNSTPQRRKS-FYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVV 408
G + P +R+S +YPT++ + R + ++R ++ GTV ILLAG H GKRVV
Sbjct: 62 GGKRVVPVQRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVV 119
Query: 409 LVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
+ L SGLLLVTGPF N PLRRIPQ YVI T
Sbjct: 120 FLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIAT 153
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +1
Query: 307 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 486
GR ++ V ++R +LK G V ILL G + GKRVVL+ +L SGLLLVTGPF+FN PLRR+
Sbjct: 31 GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVPLRRV 89
Query: 487 PQRYVIGT 510
RYVI T
Sbjct: 90 NSRYVIAT 97
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = +1
Query: 253 QRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 432
Q+ + +YP ++ + + H ++RP+L+ GT+ ILLAGR GKRV+L+ L G
Sbjct: 28 QKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
Query: 433 LLLVTGPFAFNSCPLRRIPQRYVIGT 510
+LLVTGPF N PLRR+ RYVI T
Sbjct: 86 VLLVTGPFKLNGVPLRRVNARYVIAT 111
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Frame = +1
Query: 223 EEWGNQNSTP-QRRKSFYPTQE--KICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHA 393
E+ G + P ++ + YPT++ + +S +P S+ +R + GTV ILLAG H
Sbjct: 75 EKNGGKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHR 134
Query: 394 GKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
GKRVV + L +GLL VTGP+ N CPLRRI Q YVI T
Sbjct: 135 GKRVVFLKQLKTGLLPVTGPYGVNGCPLRRINQIYVIAT 173
Score = 37.9 bits (84), Expect = 0.22
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 107 FSKSKMFHXXXXXXXXXXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLNVGSPSTP 277
FS+SKMFH V VK++ GEKNGG R +PL S P
Sbjct: 37 FSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLPLKKERRSYP 93
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/86 (47%), Positives = 54/86 (62%)
Frame = +1
Query: 253 QRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 432
++ FYP ++ + R +K + +R ++ GTV I+LAGR GKRVV + L SG
Sbjct: 59 EKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
Query: 433 LLLVTGPFAFNSCPLRRIPQRYVIGT 510
LLLVTGPF N PLRR+ Q YVIGT
Sbjct: 117 LLLVTGPFKINGVPLRRVNQAYVIGT 142
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +1
Query: 301 SGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLR 480
S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N P+R
Sbjct: 23 SSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVPVR 82
Query: 481 RIPQRYVIGT 510
R+ Y+I T
Sbjct: 83 RVNPAYIIAT 92
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = +1
Query: 337 IRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
+R ++ GTV I+LAGR AGKRVV + L SGL+L+TGPF N PLRRI QRYVI T
Sbjct: 87 LRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIAT 144
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 73.3 bits (172), Expect = 5e-12
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +1
Query: 232 GNQNSTPQRR-KSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVV 408
G P+++ +YP +K + K + +RP++K GT+ ILLAG G RVV
Sbjct: 33 GGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVILLAGVFRGSRVV 91
Query: 409 LVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
++ L SG LLVTGP+A N PL R+ QRYVI T
Sbjct: 92 VLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIAT 125
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/69 (56%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +1
Query: 310 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 483
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 484 IPQRYVIGT 510
+ RYVI T
Sbjct: 84 VNARYVIAT 92
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +1
Query: 334 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
++R ++ GTV ILLAGR GKRVV + L SGLLLVTGPF N P+RR+ Q YVI T
Sbjct: 73 KLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIAT 131
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 69.3 bits (162), Expect = 8e-11
Identities = 39/93 (41%), Positives = 55/93 (59%)
Frame = +1
Query: 232 GNQNSTPQRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 411
G + + ++ FYP + +K+ +IR +L+ GT+ ILLAG + GKRVVL
Sbjct: 56 GTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILILLAGVNRGKRVVL 115
Query: 412 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
+ L SGLLLV+GP N PLRR+ Q+ VI T
Sbjct: 116 LKALKSGLLLVSGPLKVNRVPLRRVHQKLVIAT 148
Score = 49.2 bits (112), Expect = 9e-05
Identities = 29/68 (42%), Positives = 35/68 (51%)
Frame = +3
Query: 468 VPATPYSSALCDRHSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 647
VP L STRI + N K+P+H ND YF EG DIFA+K E+
Sbjct: 135 VPLRRVHQKLVIATSTRIDISNVKVPEHINDTYF----RRHKVKKEAKEG-DIFASKPER 189
Query: 648 YVPSEQRK 671
Y P+EQRK
Sbjct: 190 YTPTEQRK 197
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/59 (62%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = +1
Query: 337 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI T
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIAT 125
Score = 37.1 bits (82), Expect = 0.39
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 510 STRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRK 671
S ++++ K+P+H ND+YF G +IFA+ K +Y SEQRK
Sbjct: 126 SLKVNVSGVKIPEHINDEYF------KRKSTAQKTGKNIFASGKTEYTVSEQRK 173
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/105 (34%), Positives = 58/105 (55%)
Frame = +1
Query: 331 RRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
R++R ++++G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I T
Sbjct: 68 RKMRSSIQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVT 127
Query: 511 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKR 645
N + + I+SA + N + + S+ KKR
Sbjct: 128 STNIFDF-----NNLSQVKEKFIQSAERI--NDEIFIKSMDVKKR 165
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 253 QRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 432
Q+ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 433 LLLVTGPFAFNSCPLRRIPQRYVIGT 510
LL++GPF N PLRR+ RYVI T
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIAT 87
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 62.1 bits (144), Expect = 1e-08
Identities = 39/85 (45%), Positives = 45/85 (52%)
Frame = +1
Query: 361 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTPPEFHSATSN 540
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T F
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVIST---FTKVDIC 69
Query: 541 CQNTSMMITSRRIRSASNVQSNAKR 615
TS +T + S Q+ A R
Sbjct: 70 KVKTSKHLTDASFKKQSAAQAQAPR 94
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 358 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
G V ILL+GR GKRVV + L SGLLLVTGPF N PL+R+ YVI T
Sbjct: 61 GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPT 111
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +1
Query: 337 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI T
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIAT 87
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +1
Query: 340 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTPPE 519
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I T
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 520 FHSATS 537
A +
Sbjct: 109 IEVAAN 114
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +1
Query: 397 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
KRVV + L SGLLL+TG F N PLRR+ Q YVI T
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIAT 193
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +1
Query: 292 CASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 471
C + P KH + + N TV I++ G+H +RVV + L G LL+TGP A N
Sbjct: 116 CKAMAKSPAFKHEKAVC-NSTPETVLIIITGQH--RRVVFLKQLSRGFLLITGPLALNLV 172
Query: 472 PLRRIPQRYVIGTPPEFHSAT 534
L R Q+ V+ T ++ T
Sbjct: 173 LLYRTHQKSVVITSTTINTQT 193
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 42.3 bits (95), Expect = 0.010
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 340 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
R +L G V ++L G A +RVV + L + L GP + N PL RI +RY++ T
Sbjct: 24 RTDLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRIDERYLLAT 80
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 41.9 bits (94), Expect = 0.014
Identities = 31/93 (33%), Positives = 47/93 (50%)
Frame = +1
Query: 241 NSTPQRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGI 420
++T ++ FYP + + + +K ++ +R ++ GTV I+LAGR VV +
Sbjct: 198 SNTEEKLPRFYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQ 250
Query: 421 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTPPE 519
L SGLLL+TG F N P G PPE
Sbjct: 251 LSSGLLLITGSFKINDVP-HSFASSEATGFPPE 282
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +1
Query: 343 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTP 513
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++ P
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHIEPLP 57
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.055
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 340 RPNLKIGTVCILLAGRHAGKRVVLVGILP 426
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.072
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 343 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 486
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 349 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 486
+ IG V + + GR AG++ V+V I+ +++TGP RR+
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRV 50
>UniRef50_Q9VHM8 Cluster: CG8136-PB, isoform B; n=3; Drosophila
melanogaster|Rep: CG8136-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 441
Score = 34.7 bits (76), Expect = 2.1
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 460 FNSCPLRRIPQRYVIGTPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQK 639
+ P R + + V P + H+ + NCQ + + ++ SA+N Q + SLPQ
Sbjct: 39 YRRLPSRSLNRSQVTDVPTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQT 95
Query: 640 KRNTFHLSSA 669
RN+ H SSA
Sbjct: 96 TRNS-HQSSA 104
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 307 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 465
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +1
Query: 400 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGT 510
+++++GI+P +L++ F F+S L IPQR +IGT
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGT 253
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 33.9 bits (74), Expect = 3.6
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 346 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVI 504
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVV 93
>UniRef50_Q05TS7 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. RS9916|Rep: Putative uncharacterized
protein - Synechococcus sp. RS9916
Length = 1159
Score = 33.1 bits (72), Expect = 6.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 505 GTPPEFHSATSNCQNTSMMITSRRIRSASNVQSNA 609
GTPP F SA +N T +++T SA+ +NA
Sbjct: 8 GTPPAFQSAATNTDGTKVILTYNEALSATTAAANA 42
>UniRef50_A4HH69 Cluster: ABC transporter, putative; n=3;
Leishmania|Rep: ABC transporter, putative - Leishmania
braziliensis
Length = 1867
Score = 33.1 bits (72), Expect = 6.3
Identities = 26/86 (30%), Positives = 36/86 (41%)
Frame = +1
Query: 328 VRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIG 507
V I +K G V LL AGK V V IL + G N P++ I R +G
Sbjct: 1557 VHNISLGVKRGEVMGLLGLNGAGKTTV-VSILAGEEVATAGEVFVNHHPVQSIESRSFVG 1615
Query: 508 TPPEFHSATSNCQNTSMMITSRRIRS 585
P++ + SN + R+RS
Sbjct: 1616 YCPQYEALLSNLSAEEHLWLYARLRS 1641
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,374,897
Number of Sequences: 1657284
Number of extensions: 12847158
Number of successful extensions: 33943
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 32664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33904
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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