Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30469
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379...    73   2e-13
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924...    72   5e-13
02_02_0470 - 10700092-10700505                                         30   1.9  
10_08_0951 - 21769342-21769752                                         29   4.5  
09_06_0097 + 20845417-20845518,20845728-20846581,20846666-208467...    28   7.8  

>04_04_0211 -
           23636377-23636532,23636624-23636805,23637853-23637959,
           23637997-23638280
          Length = 242

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +1

Query: 250 PQRRKSFYPTQEKICASSGGRPFS--KHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 423
           P  RK   PT+ +  +SS    FS  + +  +R ++  GTV ILLAGR  GKRVV +  L
Sbjct: 64  PSTRKP-NPTKLRSPSSSNLPEFSLFRFILLMRSSITPGTVLILLAGRFMGKRVVFLKQL 122

Query: 424 PSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
            SGLLLVTGPF  N  P+RR+ Q YVI T
Sbjct: 123 KSGLLLVTGPFKINGVPIRRVNQPYVIAT 151


>02_04_0433 -
           22891261-22891509,22892181-22892301,22892405-22892496,
           22892692-22892755,22892855-22892920,22893102-22893193,
           22893991-22894050,22894181-22894270,22894484-22894613,
           22895066-22895157,22895299-22895373,22895663-22895754,
           22896496-22896586,22897541-22897574,22897745-22897791,
           22899110-22899209,22899300-22899436,22900837-22901015,
           22901146-22901188,22901264-22901297,22901839-22901948,
           22902043-22902224,22903062-22903168,22903266-22903480
          Length = 833

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = +1

Query: 334 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 510
           ++R  +  GTV ILLAGR+ GKRVV +  L SGLLL+TGPF  N  P+RR+ Q YVI T
Sbjct: 70  KLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRVNQAYVIAT 128


>02_02_0470 - 10700092-10700505
          Length = 137

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 349 LKIGTVCILLAGRHAGKRVVLVGILPSG 432
           LK G   ILL GR+AG++ V+V +   G
Sbjct: 5   LKPGKAVILLQGRYAGRKAVIVRVFEEG 32


>10_08_0951 - 21769342-21769752
          Length = 136

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 349 LKIGTVCILLAGRHAGKRVVLVGILPSG 432
           LK G   ILL GR AG++ V+V +   G
Sbjct: 5   LKPGKAVILLQGRFAGRKAVIVRVFEEG 32


>09_06_0097 +
           20845417-20845518,20845728-20846581,20846666-20846726,
           20847320-20847358,20847602-20847682
          Length = 378

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = -1

Query: 382 QRGECKQFLSSGWVGSCVHAC*MDGHQMKHRFSPEWGRRTSYVEGYC 242
           ++  CK+ +S  W    VH C         +   E G    ++EG+C
Sbjct: 179 EKNRCKRLISIFWALGIVHFCLFWVKFGLKKHEKELGSSVGWIEGFC 225


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,210,056
Number of Sequences: 37544
Number of extensions: 384967
Number of successful extensions: 950
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)