Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30469
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   3.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.0  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   5.0  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   8.8  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 264 VLLPHSGENLCFIWWPSIQQACTQDP 341
           V  P S EN+   W+P I+  C   P
Sbjct: 87  VASPSSFENVTSKWYPEIKHHCPDAP 112


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 322 KHVR--RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 453
           KHV+  +   +LK  +VC+     +  +RVV  GI  SGL L +GP
Sbjct: 109 KHVKFCQFAFDLKCDSVCV---NPYHYERVVSPGIDLSGLTLQSGP 151


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -1

Query: 307 HQMKHRFSPEWGRRTSYVEGYCSGSPILLTSNLLYNNSQXLG 182
           H++    S  +GR   ++ GYC G  ++  +  L   S  +G
Sbjct: 259 HEVGLILSNRFGRYQPFLVGYCKGPELVKPTAALAGGSGTVG 300


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 208 LYNNSQXLGLLRLRVLFANXLVFSXLV 128
           L NN++ L L++++ +FA    F+ L+
Sbjct: 73  LKNNNRDLSLVKMKSMFAIGFAFTALL 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,574
Number of Sequences: 2352
Number of extensions: 14093
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)