Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30467
(587 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0121 - 10987553-10987648,10990674-10991398,10991452-109918... 30 1.2
04_03_0097 + 11166422-11166529,11166647-11167277,11167385-11167533 29 2.7
12_02_0556 + 20415683-20416841,20417563-20417726,20417837-204179... 29 3.6
12_02_0356 + 17915029-17916236,17932970-17933283,17933936-179342... 29 3.6
12_02_0034 - 12539201-12540439 29 3.6
11_06_0379 + 22933867-22933924,22934509-22934732 29 3.6
10_03_0003 + 6865111-6865223,6867322-6867796 29 3.6
06_03_1377 - 29692895-29692899,29700435-29702190 29 3.6
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 29 3.6
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 29 3.6
05_01_0105 + 696604-696846,696880-697989 29 3.6
12_01_0914 + 8901915-8902574 28 4.8
10_08_0382 - 17408873-17409440,17410711-17410840,17410936-17411068 28 4.8
10_05_0023 + 8171023-8171782,8172658-8172950 28 4.8
05_03_0201 - 9762563-9762843,9763037-9763919,9763988-9764036,980... 28 4.8
04_01_0034 - 401208-402923 28 4.8
01_06_0486 - 29729333-29729356,29729856-29730106,29730364-297304... 28 4.8
09_04_0311 + 16585406-16585521,16585713-16586175 28 6.3
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 28 6.3
04_04_1257 - 32155935-32156526,32156655-32157067 28 6.3
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 28 6.3
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 27 8.4
02_04_0376 - 22474473-22476947 27 8.4
>10_06_0121 -
10987553-10987648,10990674-10991398,10991452-10991848,
10993613-10993633
Length = 412
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 503 LHCDSCGEKGHLKSMCRNRKGN 568
L C CGEKGH S C ++ N
Sbjct: 171 LRCFECGEKGHFASKCPSKDDN 192
>04_03_0097 + 11166422-11166529,11166647-11167277,11167385-11167533
Length = 295
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 509 CDSCGEKGHLKSMCRNRKG 565
C CG+ GHL S C RKG
Sbjct: 203 CFVCGQLGHLASKCPQRKG 221
>12_02_0556 +
20415683-20416841,20417563-20417726,20417837-20417926,
20427889-20429145
Length = 889
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 482 GSVSVQALHCDSCGEKGHLKSMC 550
G +++ C CGE GH+ SMC
Sbjct: 716 GEEEMESKACPRCGEIGHIASMC 738
>12_02_0356 +
17915029-17916236,17932970-17933283,17933936-17934244,
17934613-17935439
Length = 885
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 503 LHCDSCGEKGHLKSMCRNR 559
L C CGEKGH S C ++
Sbjct: 251 LRCFECGEKGHFASKCPSK 269
>12_02_0034 - 12539201-12540439
Length = 412
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 503 LHCDSCGEKGHLKSMCRNR 559
L C CGEKGH S C ++
Sbjct: 276 LRCFECGEKGHFASKCPSK 294
>11_06_0379 + 22933867-22933924,22934509-22934732
Length = 93
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -3
Query: 525 SPHESQCSACTDTDPPHGPACRSVCRRSEPPRALRR--PDAC 406
+P +S C + + P +C++ C+ PP A PD C
Sbjct: 36 NPQDSSCGSIVNPGPCFPSSCKTYCKIQVPPNADGNCTPDGC 77
>10_03_0003 + 6865111-6865223,6867322-6867796
Length = 195
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 503 LHCDSCGEKGHLKSMCRNR 559
L C CGEKGH S C ++
Sbjct: 167 LRCFECGEKGHFASKCPSK 185
>06_03_1377 - 29692895-29692899,29700435-29702190
Length = 586
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 503 LHCDSCGEKGHLKSMCRNR 559
L C CGEKGH S C ++
Sbjct: 276 LRCFECGEKGHFASKCPSK 294
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 503 LHCDSCGEKGHLKSMCRNR 559
L C CGEKGH S C ++
Sbjct: 276 LRCFECGEKGHFASKCPSK 294
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 509 CDSCGEKGHLKSMCRNRKGNQ 571
C CG GH+ S C N+K ++
Sbjct: 366 CYECGTPGHISSSCPNKKASE 386
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 509 CDSCGEKGHLKSMCRNRK 562
C CG GHL S C N+K
Sbjct: 409 CYECGIPGHLSSACPNKK 426
>05_01_0105 + 696604-696846,696880-697989
Length = 450
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 503 LHCDSCGEKGHLKSMCRNR 559
L C CGEKGH S C ++
Sbjct: 265 LRCFECGEKGHFASKCPSK 283
>12_01_0914 + 8901915-8902574
Length = 219
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 503 LHCDSCGEKGHLKSMCRNR 559
L C CGEKGH S C ++
Sbjct: 195 LRCFECGEKGHFVSKCLSK 213
>10_08_0382 - 17408873-17409440,17410711-17410840,17410936-17411068
Length = 276
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 319 WHQHWKQRIDMRWRLGALGAAHRLRPRAK 405
WH H K+R+D +L A G RP +
Sbjct: 108 WHTHLKKRLDDERKLAAAGGGGGRRPHTR 136
>10_05_0023 + 8171023-8171782,8172658-8172950
Length = 350
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 482 GSVSVQALHCDSCGEKGHLKSMC 550
G +++ C CGE GH+ SMC
Sbjct: 204 GEEEMESKACTRCGEIGHVASMC 226
>05_03_0201 -
9762563-9762843,9763037-9763919,9763988-9764036,
9806710-9807680
Length = 727
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 482 GSVSVQALHCDSCGEKGHLKSMC 550
G +++ C CGE GH+ SMC
Sbjct: 585 GEEEMESKACTRCGEIGHVASMC 607
>04_01_0034 - 401208-402923
Length = 571
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 531 PFSPHESQCSACTDTDPPHGPACRSVCRRSEPPRALRRPDACLRSRT 391
P P Q A PP P R + PP +RPD C R T
Sbjct: 307 PPPPPPQQQRAKPSRPPPPPPPLDPPPRAAAPPAKCKRPDGCERFAT 353
>01_06_0486 -
29729333-29729356,29729856-29730106,29730364-29730466,
29730571-29730663,29730773-29730905,29731184-29731272,
29731385-29731553,29731930-29732016,29732388-29732506,
29732554-29732706
Length = 406
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 497 QALHCDSCGEKGHLKSMC 550
Q HC CGE+GH + C
Sbjct: 373 QPRHCSQCGERGHNRRNC 390
>09_04_0311 + 16585406-16585521,16585713-16586175
Length = 192
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 507 CSACTDTDPPHGPACRSVC 451
C+ CTD PP ACR C
Sbjct: 67 CAVCTDDLPPAATACRLPC 85
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 509 CDSCGEKGHLKSMCRNRKGN 568
C CGE+GH++ C+N N
Sbjct: 126 CYRCGERGHIERNCQNSPRN 145
>04_04_1257 - 32155935-32156526,32156655-32157067
Length = 334
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 482 GSVSVQALHCDSCGEKGHLKSMC 550
G +++ C CGE GH+ SMC
Sbjct: 161 GEEEMESKACIRCGEIGHIASMC 183
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 509 CDSCGEKGHLKSMCRNRKGN 568
C CGE+GH++ C+N N
Sbjct: 173 CYRCGERGHIERNCQNSPRN 192
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 34 PEEKDFDILVK-LVKDHLEPERSEIAERHIFRQRKQQNNESIRSYLQSL 177
P +K+ +L LVK +EP+ E+A + + ++ + ++ S ++SL
Sbjct: 367 PVKKNEKVLASVLVKPPMEPKEKEVAAKKMLKKPDKVQKNAVHSNIRSL 415
>02_04_0376 - 22474473-22476947
Length = 824
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 489 TDPPHGPACRSVCRRSEPPRALRRPDACLRS 397
T P + RS+CRR++ RALR +RS
Sbjct: 131 TAPTYNAVIRSLCRRADLARALRYLSLMVRS 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,978,240
Number of Sequences: 37544
Number of extensions: 228064
Number of successful extensions: 783
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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