Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30467
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    26   0.79 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   1.8  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   3.2  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   3.2  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   3.2  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   4.2  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   5.5  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   7.3  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   9.7  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 26.2 bits (55), Expect = 0.79
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 398 LGRSL*AAPSAPSRHRMSIRCFQC 327
           +G S+    SAP + + ++RCF+C
Sbjct: 271 VGHSVCLVRSAPKQQQSAVRCFRC 294


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 485 SVSVQALHCDSCGEKGHLKSMCRN 556
           ++++Q   C  C E+GH+   CR+
Sbjct: 356 AINLQQQRCYRCLERGHIARECRS 379


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 555 FRHIDFRCPFSPHESQCSACTDTDPPHGPACRSVCRRSEPPR 430
           FRH+DF    +    +  + +  D      C   CR  EPPR
Sbjct: 126 FRHLDFSTSATAELRRNPSLSAPDE-----CARACREGEPPR 162


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 555 FRHIDFRCPFSPHESQCSACTDTDPPHGPACRSVCRRSEPPR 430
           FRH+DF    +    +  + +  D      C   CR  EPPR
Sbjct: 126 FRHLDFSTSATAELRRNPSLSAPDE-----CARACREGEPPR 162


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 488 VSVQALHCDSCGEKGHLKSMCRN 556
           VSV    C  C E+GHL   C++
Sbjct: 383 VSVDRQRCYRCLERGHLARDCQS 405


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRKGNQ 571
           C  C E+GHL   CR+    Q
Sbjct: 477 CYRCLERGHLAHACRSSTDRQ 497


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRKGNQ 571
           C  C E GH+ S CR+    Q
Sbjct: 508 CFRCLEMGHIASNCRSTADRQ 528


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRN 556
           C  CG  GH K  C N
Sbjct: 299 CWKCGLSGHKKQACTN 314


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 494 VQALHCDSCGEKGHLKSMCRN 556
           ++ L C  C E+GH+   C +
Sbjct: 401 IEKLRCYRCLERGHVSRDCHS 421


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,670
Number of Sequences: 2352
Number of extensions: 8922
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)