Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30467
         (587 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071205-1|AAL48827.1|  184|Drosophila melanogaster RE24565p pro...    30   2.7  
AE013599-1925|AAF58228.3|  437|Drosophila melanogaster CG12863-P...    30   2.7  
AY094749-1|AAM11102.1|  486|Drosophila melanogaster GM05521p pro...    29   3.5  
AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p pro...    29   3.5  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   3.5  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   3.5  
X07656-1|CAA30502.1|  273|Drosophila melanogaster protein ( Dros...    29   4.7  
AY061312-1|AAL28860.1|  647|Drosophila melanogaster LD23155p pro...    29   4.7  
AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein ...    29   4.7  
AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA...    29   4.7  
AE013599-3127|AAF46670.2|  647|Drosophila melanogaster CG4030-PA...    29   4.7  
AY095057-1|AAM11385.1|  258|Drosophila melanogaster LD46359p pro...    28   8.2  
AJ249466-1|CAB60724.1|  258|Drosophila melanogaster DXl6 protein...    28   8.2  
AF232774-1|AAF43414.1|  258|Drosophila melanogaster SR family sp...    28   8.2  
AE014134-1188|AAF52454.1|  258|Drosophila melanogaster CG10203-P...    28   8.2  

>AY071205-1|AAL48827.1|  184|Drosophila melanogaster RE24565p
           protein.
          Length = 184

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 506 HCDSCGEKGHLKSMCRN 556
           HC  CG+KGH+++ C N
Sbjct: 122 HCWMCGQKGHIETKCPN 138


>AE013599-1925|AAF58228.3|  437|Drosophila melanogaster CG12863-PA
           protein.
          Length = 437

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 506 HCDSCGEKGHLKSMCRN 556
           HC  CG+KGH+++ C N
Sbjct: 375 HCWMCGQKGHIETKCPN 391


>AY094749-1|AAM11102.1|  486|Drosophila melanogaster GM05521p
           protein.
          Length = 486

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +1

Query: 25  PDLPEEKDFDILV--KLVKDHLEP-ERSEIAERHIFRQRKQQNNESI 156
           P+ PEEK F+I+V  + V+   EP E  ++ E+ +  ++ +QN  S+
Sbjct: 54  PEKPEEKPFEIVVLEETVESKREPDEEGKVREKVVKTKKIKQNRGSV 100


>AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p
           protein.
          Length = 417

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRK 562
           C SCG  GHL   CRN++
Sbjct: 171 CTSCGGNGHLTKDCRNKR 188


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +1

Query: 25    PDLPEEKDFDILV--KLVKDHLEP-ERSEIAERHIFRQRKQQNNESI 156
             P+ PEEK F+I+V  + V+   EP E  ++ E+ +  ++ +QN  S+
Sbjct: 12105 PEKPEEKPFEIVVLEETVESKREPDEEGKVREKVVKTKKIKQNRGSV 12151


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +1

Query: 25    PDLPEEKDFDILV--KLVKDHLEP-ERSEIAERHIFRQRKQQNNESI 156
             P+ PEEK F+I+V  + V+   EP E  ++ E+ +  ++ +QN  S+
Sbjct: 13951 PEKPEEKPFEIVVLEETVESKREPDEEGKVREKVVKTKKIKQNRGSV 13997


>X07656-1|CAA30502.1|  273|Drosophila melanogaster protein (
           Drosophila melanogasterretrotransposon 1731 sequence. ).
          Length = 273

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRKGNQ 571
           C +CGE+ H K+ CR  K N+
Sbjct: 226 CYNCGERRHFKANCRREKVNK 246


>AY061312-1|AAL28860.1|  647|Drosophila melanogaster LD23155p
           protein.
          Length = 647

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 37  EEKDFDILVKLVKDHLEPERSEIAERHIFRQRKQQNNESIRSYLQSLKHLAKT 195
           ++K  D+L K + +  E    E A R     + Q+  E+ +S +QSL+  AKT
Sbjct: 276 QQKQVDLLQKQLVESRETLVKEAALRKDLEDQWQEKREAHKSEVQSLRDQAKT 328


>AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein
           protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRK 562
           C SCG  GHL   CRN++
Sbjct: 541 CTSCGGTGHLTKDCRNKR 558


>AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA
           protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRK 562
           C SCG  GHL   CRN++
Sbjct: 541 CTSCGGTGHLTKDCRNKR 558


>AE013599-3127|AAF46670.2|  647|Drosophila melanogaster CG4030-PA
           protein.
          Length = 647

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 37  EEKDFDILVKLVKDHLEPERSEIAERHIFRQRKQQNNESIRSYLQSLKHLAKT 195
           ++K  D+L K + +  E    E A R     + Q+  E+ +S +QSL+  AKT
Sbjct: 276 QQKQVDLLQKQLVESRETLVKEAALRKDLEDQWQEKREAHKSEVQSLRDQAKT 328


>AY095057-1|AAM11385.1|  258|Drosophila melanogaster LD46359p
           protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRKGNQ 571
           C  CG +GH    CR RK  Q
Sbjct: 117 CYECGGRGHFARHCRERKARQ 137


>AJ249466-1|CAB60724.1|  258|Drosophila melanogaster DXl6 protein
           protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRKGNQ 571
           C  CG +GH    CR RK  Q
Sbjct: 117 CYECGGRGHFARHCRERKARQ 137


>AF232774-1|AAF43414.1|  258|Drosophila melanogaster SR family
           splicing factor 9G8 protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRKGNQ 571
           C  CG +GH    CR RK  Q
Sbjct: 117 CYECGGRGHFARHCRERKARQ 137


>AE014134-1188|AAF52454.1|  258|Drosophila melanogaster CG10203-PA
           protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 509 CDSCGEKGHLKSMCRNRKGNQ 571
           C  CG +GH    CR RK  Q
Sbjct: 117 CYECGGRGHFARHCRERKARQ 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,513,077
Number of Sequences: 53049
Number of extensions: 381716
Number of successful extensions: 1405
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)