Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30465
(591 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 24 1.1
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 23 1.9
DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory pro... 23 2.6
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.9
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 5.9
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 5.9
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 7.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 7.8
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 23.8 bits (49), Expect = 1.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 75 VHQHRFGEVHPFPNWRRNSAG 13
V+ H + HP+PN+ AG
Sbjct: 168 VYTHHYARYHPYPNFGVPPAG 188
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -2
Query: 191 NVHTSVPPSCSMTRR*VTASPWLISSPSFFIEFVTDDLGSISTASVRS 48
+++ + S S + VTA+P L SP++ + GS S+ ++ S
Sbjct: 160 SINNNTSTSSSASSPSVTAAPHLRDSPNYIKPQLHVSTGSTSSPTIAS 207
>DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory
protein 10 protein.
Length = 129
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 286 CSNCTEKETSHKRRV 330
CS CTEK+ R++
Sbjct: 75 CSKCTEKQKEGSRKI 89
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.9
Identities = 5/14 (35%), Positives = 8/14 (57%)
Frame = -1
Query: 72 HQHRFGEVHPFPNW 31
+ HR ++H P W
Sbjct: 298 YHHRTADIHEMPQW 311
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.9
Identities = 5/14 (35%), Positives = 8/14 (57%)
Frame = -1
Query: 72 HQHRFGEVHPFPNW 31
+ HR ++H P W
Sbjct: 298 YHHRTADIHEMPQW 311
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.9
Identities = 5/14 (35%), Positives = 8/14 (57%)
Frame = -1
Query: 72 HQHRFGEVHPFPNW 31
+ HR ++H P W
Sbjct: 298 YHHRTADIHEMPQW 311
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.9
Identities = 5/14 (35%), Positives = 8/14 (57%)
Frame = -1
Query: 72 HQHRFGEVHPFPNW 31
+ HR ++H P W
Sbjct: 298 YHHRTADIHEMPQW 311
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.9
Identities = 5/14 (35%), Positives = 8/14 (57%)
Frame = -1
Query: 72 HQHRFGEVHPFPNW 31
+ HR ++H P W
Sbjct: 298 YHHRTADIHEMPQW 311
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 5.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 314 EVSFSVQFEQHPRELHY 264
EV+FSVQ Q LHY
Sbjct: 249 EVTFSVQKIQELSHLHY 265
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.4 bits (43), Expect = 5.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 314 EVSFSVQFEQHPRELHY 264
EV+FSVQ Q LHY
Sbjct: 205 EVTFSVQKIQELSHLHY 221
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = -3
Query: 277 ENCIMAYPLSRPGLWCCKCR 218
+ C Y L + WC CR
Sbjct: 572 KKCRARYGLDQQNQWCKPCR 591
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/20 (35%), Positives = 9/20 (45%)
Frame = -3
Query: 277 ENCIMAYPLSRPGLWCCKCR 218
+ C Y L + WC CR
Sbjct: 464 KKCRARYGLDQQNQWCKPCR 483
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,289
Number of Sequences: 336
Number of extensions: 3104
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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