Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30463
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.81 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   5.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 200 PPGLQGSSLGKDFSPVYSRPGSVPRTTAT 286
           PP L  +++GK F P    P   P  ++T
Sbjct: 52  PPPLADAAVGKGFHPWKKSPQGAPSPSST 80



 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 399 TDNITYNNPGRLTCAQACGINVSVLRSLPCPTATQAPP 512
           T N TY++   +T   +     S    L  P AT  PP
Sbjct: 91  TSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPP 128


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 462 VSVLRSLPCPTATQAPPAK 518
           + V R++P PT  + PPA+
Sbjct: 200 MQVKRNVPKPTVPKIPPAE 218


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 462 VSVLRSLPCPTATQAPPAK 518
           + V R++P PT  + PPA+
Sbjct: 200 MQVKRNVPKPTVPKIPPAE 218


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 137 LTLIHNTLVMIAKRKN 90
           + L+H TLV +AK  N
Sbjct: 81  MVLLHKTLVRVAKSLN 96


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 236 FSPVYSRPGSVP 271
           + PVY RPG  P
Sbjct: 400 YVPVYIRPGDTP 411


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 236 FSPVYSRPGSVP 271
           + PVY RPG  P
Sbjct: 225 YVPVYIRPGDTP 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,419
Number of Sequences: 336
Number of extensions: 2538
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)