Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30463
(579 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 39 0.003
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 39 0.003
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 39 0.003
SB_15403| Best HMM Match : CH (HMM E-Value=0) 39 0.003
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 38 0.004
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 38 0.008
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 36 0.032
SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.073
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.073
SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 34 0.073
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.073
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 33 0.13
SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12) 33 0.13
SB_45072| Best HMM Match : Kazal_2 (HMM E-Value=5.8e-06) 32 0.29
SB_6854| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 31 0.51
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 0.51
SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_38508| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_52414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_12293| Best HMM Match : OATP (HMM E-Value=0) 30 1.2
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 30 1.2
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 30 1.6
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0) 29 2.1
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 29 2.7
SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.7
SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16) 29 2.7
SB_37368| Best HMM Match : Kazal_1 (HMM E-Value=9.2e-09) 29 3.6
SB_30872| Best HMM Match : KID (HMM E-Value=4.7) 28 4.8
SB_21310| Best HMM Match : Peptidase_C33 (HMM E-Value=3.4) 28 4.8
SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07) 28 4.8
SB_5319| Best HMM Match : Ldl_recept_a (HMM E-Value=7.56701e-44) 28 4.8
SB_4860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_57511| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.3
SB_5622| Best HMM Match : DUF6 (HMM E-Value=2.6e-12) 27 8.4
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +3
Query: 336 PAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLP 485
P + +C+R CP A +PVCGTD TY N L A C N ++ + P
Sbjct: 19 PQVDKCVRPCP--AINDPVCGTDGKTYGNECMLGAA-TCHSNGTITLAYP 65
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +3
Query: 336 PAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
P +C CP Y PVCG+DN+TY+NP L A C N ++
Sbjct: 35 PKPDKCAPICPKI--YRPVCGSDNVTYSNPCMLRSA-TCKSNGTI 76
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 306 PNNLGTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLP 485
P ++ A +C R+C T E PVCGTD TY+N L A + + P
Sbjct: 103 PQSICVNVNGTATCECPRAC--TRELMPVCGTDQKTYDNMCLLERAACKDDGLMLAHEGP 160
Query: 486 CPT 494
CPT
Sbjct: 161 CPT 163
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGIN--VSVLRSLPCPTATQAPPAKL 521
C+ + T EY PVCG+D TY NP L ++C N +SV++ C + + P +
Sbjct: 40 CVCNEACTREYAPVCGSDGKTYPNPCALE-VESCKTNTRISVIKKGSCDDSALSDPCDI 97
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 339 AIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCA-QAC--GINVSVLRSLPCP 491
A+ +C ++C T EY P CGTD TY P R A Q+C G + + PCP
Sbjct: 275 AVCECPKAC--TREYKPACGTDGNTY--PNRCVLAIQSCETGEKLQLAHDGPCP 324
Score = 34.3 bits (75), Expect = 0.073
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNNPGRL---TCAQACGINVSVLRSLPCP 491
+C + C T +Y PVCG+DN TY N L C + +L PCP
Sbjct: 195 ECPKVC--TLDYTPVCGSDNKTYANLCNLEVEACKPENTDKLQLLHDGPCP 243
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQ 446
+C+ S T EY PVCG+D TYNN LT A+
Sbjct: 721 KCVCSAACTREYAPVCGSDGNTYNNLCLLTAAR 753
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 381 YNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLPCPTATQAPPAKL 521
Y+P+CGTD TYNN L A AC S++R P + A L
Sbjct: 1243 YDPICGTDGKTYNNDKDLESA-ACAQQTSIVRWHKGPCTVEPSCANL 1288
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 342 IQQCIRSCPVTAEYNPVCGTDNITYNN 422
I +C RSCP + Y PVCG D TY+N
Sbjct: 970 ICECPRSCP-SVNY-PVCGDDGQTYDN 994
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 360 SCPVTAEYNPVCGTDNITYNNPGRLTCAQAC 452
+CP+ + VCGTD ITY+N RL A++C
Sbjct: 1312 ACPLVK--SRVCGTDGITYDNLCRLR-AESC 1339
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +3
Query: 342 IQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLP 485
+ C+R CP A Y PVCGTD TY N L A C N ++ + P
Sbjct: 41 VDPCVRPCP--AIYMPVCGTDGKTYGNKCMLGAA-TCRSNGTITLAYP 85
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNNP 425
+C+R C T E NPVCG+D TY+NP
Sbjct: 117 RCMRRC--TKELNPVCGSDGKTYDNP 140
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 381 YNPVCGTDNITYNNPGRLTCAQACGINVSV 470
Y PVCG+DN+TY+NP L A C N ++
Sbjct: 177 YQPVCGSDNVTYSNPCMLRSA-TCKSNGTI 205
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQA-CGINVSVLRSLPC-----PTATQAPP 512
C R CP + PVCG+D TYNN + A N++V PC P T +PP
Sbjct: 1068 CPRRCP--KKLMPVCGSDGKTYNNECLMRAASCKANKNITVSSYFPCPETVPPITTTSPP 1125
Query: 513 AKL 521
+++
Sbjct: 1126 SQV 1128
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNN 422
C CP +E PVCGTD +TY+N
Sbjct: 598 CPPGCP--SEVKPVCGTDGVTYDN 619
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 381 YNPVCGTDNITYNNPGRLTCAQACGINVSV 470
Y PVCG+DN+TY+NP L A C N ++
Sbjct: 34 YQPVCGSDNVTYSNPCMLRSA-TCKSNGTI 62
>SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 363 CP--VTAEYNPVCGTDNITYNNPGRLTCAQAC 452
CP VTA+YNPVCG+D TY N + Q C
Sbjct: 10 CPMAVTADYNPVCGSDGRTYPNRASME-VQGC 40
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 34.7 bits (76), Expect = 0.055
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 363 CPV--TAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLPCPTATQAPPAK 518
CP+ T EY PVCGTD TY N + A AC + V + P + P K
Sbjct: 1295 CPIFCTYEYMPVCGTDGKTYGNKCEMR-ASACLKSTMVTVAYPGECESNDPCGK 1347
Score = 33.9 bits (74), Expect = 0.096
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 PVTAEYNPVCGTDNITYNNPGRLTCAQAC--GINVSVLRSLPCPTATQAPPAKLIKIVNQ 539
P TA+Y+PVC +D TY N + A C +N+ V+R+ C P IK ++
Sbjct: 1816 PCTADYSPVCASDGQTYPNVCTMDSA-GCQKSMNLKVVRNGTCVRKEPKNPCGNIKCTHK 1874
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +3
Query: 363 CPV---TAEYNPVCGTDNITYNNPGRLTCAQAC--GINVSVLRSLPCP 491
CP+ +A + VCG+D +TY+N LT AC N++V+ PCP
Sbjct: 1440 CPMFKCSANRSDVCGSDRMTYSNECTLT-QTACQESKNLTVVSQGPCP 1486
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLP 485
C CP+ Y+PVCG+D Y+N + A AC + SLP
Sbjct: 1367 CPSICPL--HYSPVCGSDGNMYSNECAMRAA-ACKQQKMITPSLP 1408
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQA-CGINVSVLRSL 482
+C+ T EY PVC +D Y P R+T A C N+ VLR++
Sbjct: 1966 ECVCRTVTTLEYRPVCASDGKIY--PNRMTMENAGCEKNM-VLRAV 2008
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNNP 425
+C + CP +CGTD I+Y +P
Sbjct: 51 KCPQGCPAPNGDETICGTDGISYPSP 76
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 369 VTAEYNPVCGTDNITYNNPGRLTCAQA-CGIN--VSVLRSLPCPTA 497
+TA+Y PVC +D TY P R++ A C N + ++ CP A
Sbjct: 1527 MTADYTPVCASDGKTY--PNRMSMENAGCEKNMILRIVSQGECPKA 1570
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +3
Query: 336 PAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRL---TCAQACGINVSVLRSLPCPTATQA 506
P + + CP + + VCG+D TY+N L TC Q + V + P +
Sbjct: 1885 PMCECVVNECPKNS--SKVCGSDGWTYDNECFLKLYTCRQGKDVKVQQMGECPAKISVSQ 1942
Query: 507 PPAKL 521
P +
Sbjct: 1943 DPCDI 1947
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 318 GTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYNN 422
GT + S A CI ++++PVCG D +TY N
Sbjct: 566 GTCSASSANASCICPTNCPSDWDPVCGDDGVTYQN 600
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 384 NPVCGTDNITYNNPGRLTCAQ-ACGINVSVLRSLPC 488
+PVCGTDN Y N L A A I++ VL PC
Sbjct: 822 DPVCGTDNKEYANECLLNVAACAANIHLRVLNKGPC 857
Score = 31.1 bits (67), Expect = 0.68
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +3
Query: 363 CPV--TAEYNPVCGTDNITYNNP---GRLTCAQACGINVSVLRSLPCPTAT 500
CP T +Y PVCG D +Y + RL C + I ++ PC +AT
Sbjct: 1753 CPECRTLKYTPVCGDDGKSYLSTCMLKRLACLKGVHIAIASKGRCPCKSAT 1803
Score = 30.7 bits (66), Expect = 0.90
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV--LRS---LPCPTAT 500
C +SCP++ Y P+C ++ T+ N L A AC N SV L + PC T T
Sbjct: 1361 CTKSCPLS--YEPLCASNGKTFPNQCALDMA-ACKANGSVTFLHTGFCTPCSTVT 1412
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 339 AIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQAC--GINVSVLRSLPC 488
A+ C R ++ PVCG+D TY N RL + C G V+VLR C
Sbjct: 432 AVCACPRFEDCPRDFRPVCGSDLRTYVNLCRLQ-VEVCQTGRAVTVLRQGAC 482
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
CI Y+PVCG++ TY N LT A+AC N+ +
Sbjct: 1820 CICPTYCRLNYDPVCGSNRKTYLNFCSLT-AEACKKNLPI 1858
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 363 CPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
CP E +PVCG+D TY N +L ++C N +V
Sbjct: 513 CP--KEASPVCGSDGKTYENECKLR-VESCKANQNV 545
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGI--NVSVLRSLPC 488
C CP+ Y PVCGTD T+ N L ++C I ++ V S PC
Sbjct: 1538 CSSRCPLV--YKPVCGTDMETHIN-ACLLKLKSCQIESDLDVAYSGPC 1582
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGI--NVSVLRSLPC 488
C+ CP + VCG+D +TY + L A++C NV+ L C
Sbjct: 1431 CLDQCPPDNQNASVCGSDLVTYRSECELK-AKSCNAMRNVTTLFKGEC 1477
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
C CP+T YN +CG+D ++Y + + A AC N ++
Sbjct: 1610 CPERCPLT--YNLICGSDGVSYLSACAMR-ATACQQNRNI 1646
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 291 TTTRAPNNLGTTTMSPAIQQCIRSCPVTAEYN----PVCGTDNITYNN 422
+T + PNN G S C+ CP + + PVCG+D ++Y N
Sbjct: 1123 STVQCPNN-GRCDASSGSPVCL--CPRLEDCSDLNTPVCGSDKVSYRN 1167
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 34.3 bits (75), Expect = 0.073
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
C +C T + PVCGTDN TY+N L QAC N +V
Sbjct: 161 CPENCSSTVD--PVCGTDNNTYDNE-CLMRQQACVANATV 197
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
C +C T + PVCG+DN TY+N L QAC N +V
Sbjct: 275 CPENCSSTVD--PVCGSDNNTYDNE-CLMRQQACVANTTV 311
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVL 473
C+ CP T + PV GTDN Y+N L A AC N +L
Sbjct: 90 CVEPCPKTLK--PVYGTDNKNYDNECLLKLA-ACKSNTRIL 127
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 363 CPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVL 473
CP T + PV GTDN Y+N L A AC N +L
Sbjct: 208 CPKTLK--PVYGTDNKNYDNECLLKLA-ACKSNTRIL 241
>SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26)
Length = 143
Score = 34.3 bits (75), Expect = 0.073
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
C +C T + PVCGTDN TY+N L QAC N +V
Sbjct: 27 CPENCSSTVD--PVCGTDNNTYDNE-CLMRQQACVANATV 63
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVL 473
C+ CP T + PV GTDN Y+N L A AC N +L
Sbjct: 98 CVEPCPKTLK--PVYGTDNKNYDNECLLKLA-ACKSNTRIL 135
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 34.3 bits (75), Expect = 0.073
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
C +C T + PVCGTDN TY+N L QAC N +V
Sbjct: 1135 CPENCSSTVD--PVCGTDNNTYDNE-CLMRQQACVANATV 1171
Score = 33.9 bits (74), Expect = 0.096
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
+C CP T + PVCG+DN Y+N L A+AC N ++
Sbjct: 1372 ECSEDCPKTLK--PVCGSDNNDYDNE-CLMQARACATNKTI 1409
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNN 422
C + CP + + VCGTDNITYNN
Sbjct: 1444 CSKVCPRSLDL--VCGTDNITYNN 1465
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 285 RLTTTRAPNNLGTTTMSPAIQQCIRSCPVTAEYNP-----VCGTDNITYNNPGRLTCAQA 449
R T TRA T +P ++ +T++Y P VCGTDNITY+N L QA
Sbjct: 1485 RATVTRA-----NCTNAPLLRTLFAKLWLTSQYCPASLDLVCGTDNITYSNE-CLMKYQA 1538
Query: 450 CGIN 461
C N
Sbjct: 1539 CRTN 1542
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
C +C T + PVCG+DN TY+N L QAC N +V
Sbjct: 1206 CPENCSSTVD--PVCGSDNNTYDNE-CLMRQQACVANTTV 1242
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVL 473
C+ CP T + PV GTDN Y+N L A AC N +L
Sbjct: 1064 CVEPCPKTLK--PVYGTDNKNYDNECLLKLA-ACKSNTRIL 1101
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVL 473
C+ CP T + PV GTDN Y+N L A AC N +L
Sbjct: 1277 CVEPCPKTLK--PVYGTDNKNYDNECLLKLA-ACKSNTRIL 1314
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +3
Query: 363 CPVTAEYN-PVCGTDNITYNNPGRLTCAQACGINVSVLRSL--PCP 491
CP + + PVCGT+N TY + L AC N S+ L PCP
Sbjct: 679 CPECPQVDKPVCGTNNKTYTSECALQ-VDACKTNTSIDVQLDKPCP 723
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 360 SCP--VTAEYNPVCGTDNITYNNP---GRLTCAQACGINVSVLRSLPC 488
SCP T E P+C +D TY+N + C +NV+ R+ PC
Sbjct: 2153 SCPDDCTNETKPICASDGQTYDNECLMQKRACENNQNLNVTSDRACPC 2200
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNN 422
C + CP+T + PVC +DN TY N
Sbjct: 1580 CPKICPITLD--PVCASDNNTYPN 1601
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 348 QCIRSCPVTAE--YNPVCGTDNITYNNPGRLTCAQACGINVSV 470
QC+ CP + PVCG+D +TY + + +AC N S+
Sbjct: 2622 QCV--CPPACKPTLTPVCGSDGVTYESECGM-IQKACQTNTSI 2661
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRL---TCAQACGINVSVLRSLPCP 491
C SC + P+CG++N TY N L +C I + + P P
Sbjct: 289 CPSSCGDESLPQPICGSNNKTYANECELRMDSCKNNKSIAIQFRKECPAP 338
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +3
Query: 360 SCP--VTAEYNPVCGTDNITYNNP---GRLTCAQACGINVSVLRSLPCPTAT-QAPPAKL 521
SCP T EY+P+CG+D TY+N R +C Q + + PC T +PP
Sbjct: 5153 SCPDICTFEYSPLCGSDGKTYDNQCEMERASCLQNKDLTGKPGKCDPCEDYTCTSPPYSE 5212
Query: 522 IKIVN 536
+N
Sbjct: 5213 CTAIN 5217
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3
Query: 291 TTTRAPNNLGTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYNN 422
T T P + T + C C T EY PVCGTD +Y+N
Sbjct: 5204 TCTSPPYSECTAINGSPVCTCNSIC--TLEYAPVCGTDGQSYDN 5245
Score = 31.1 bits (67), Expect = 0.68
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 285 RLTTTRAPNNLGTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGIN- 461
+++ AP A+ C+ SCP + PVCG+D Y+N L AC N
Sbjct: 5768 KISPCSAPYAKCLVVQDEAVCTCL-SCPNILD--PVCGSDGKNYDNECNLR-QNACKTNT 5823
Query: 462 -VSVLRSLPCP 491
++V+R CP
Sbjct: 5824 LITVVRRDACP 5834
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Frame = +3
Query: 339 AIQQCIRSCPVTAEYNPVCGTDNITYNNPGRL---TCAQACGINVSVLRS---LPCPTAT 500
A+ C +SCP + PVCG+D TYNN L C I V+ L S PT T
Sbjct: 5617 AVCMC-QSCPSINK--PVCGSDGKTYNNECELRQYACKSDSLITVASLSSCLTTVSPTTT 5673
Query: 501 QAP 509
P
Sbjct: 5674 SLP 5676
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGIN--VSVLRSLPCPT 494
+C+ + Y PVCGTD Y+N L A +C N + V CPT
Sbjct: 5292 ECVCDGICSLVYAPVCGTDGQEYSNECNLQIA-SCRKNELIEVASRGSCPT 5341
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 378 EYNPVCGTDNITYNN 422
+Y PVCGTD TY N
Sbjct: 5558 DYTPVCGTDGETYEN 5572
>SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12)
Length = 77
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 372 TAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLPCP 491
T +Y+PVCG+D TY N L A C ++ + CP
Sbjct: 33 TLQYDPVCGSDGKTYGNMCFLKAAIKCNPDLYMKHKGACP 72
>SB_45072| Best HMM Match : Kazal_2 (HMM E-Value=5.8e-06)
Length = 361
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 369 VTAEYNPVCGTDNITYNNPGRLTC 440
V +++NPVCG D++TY P C
Sbjct: 138 VKSQFNPVCGADDVTYFTPCHAGC 161
>SB_6854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 31 IEAKVISILHFQEI-MDKLVVFFLFAIITNVLCMSVRNKRQSNDDDDVLDD 180
IE +I+ L I M ++F A+ TN++C N ND+D+ DD
Sbjct: 45 IEIAIITRLGSYNIDMGPQIIFEYVAMATNIICTCTNNNNNDNDNDNDDDD 95
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 31.9 bits (69), Expect = 0.39
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +3
Query: 303 APNNLGTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGIN--VSVLR 476
AP + + A+ C+ SCP + PVCG++ YNN L AC N ++V R
Sbjct: 189 APYSKCMSVRGKAVCMCM-SCPKMNK--PVCGSNGKDYNNECELQ-QFACKTNTMITVAR 244
Query: 477 SLPC-PTAT---QAPPAKLIKIVNQII 545
PC P T AP AK + + + +
Sbjct: 245 RSPCHPCQTSPCSAPYAKCLVVQGEAV 271
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 285 RLTTTRAPNNLGTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGIN- 461
+++ AP A+ C+ SCP + PVCG+D Y+N L AC N
Sbjct: 89 KISPCSAPYAKCLVVQDEAVCTCL-SCPNILD--PVCGSDGKNYDNECNLR-QNACKTNT 144
Query: 462 -VSVLRSLPC 488
++V+R C
Sbjct: 145 LITVVRRDAC 154
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 339 AIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGIN--VSVLRSLPCP--TATQA 506
A+ C+ SCP + PVCG+D Y+N +L AC N ++++ CP A
Sbjct: 270 AVCTCL-SCPNMLD--PVCGSDGKNYDNVCKLR-QNACKTNTLITLISRDACPFTEARFT 325
Query: 507 PPAK 518
PP++
Sbjct: 326 PPSQ 329
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNN 422
C R+C T Y PVCGTD TY N
Sbjct: 39 CNRAC--TKIYRPVCGTDGKTYGN 60
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 339 AIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSV 470
A+ +C CP +E +PVCG D TY++ + A+AC S+
Sbjct: 799 AVCECNTECP--SEASPVCGQDGRTYSSTCAMD-ARACQAQTSI 839
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITY-NNPGRLTCAQACGINVSV 470
C+ + Y+PVCG D TY NN R+ A AC + +
Sbjct: 250 CVCPSDCSHTYSPVCGGDKTTYINNCTRI--AAACNMKKDI 288
>SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLPC 488
+C CP +E +PVCGTD TY + L A+ G V ++ C
Sbjct: 205 RCHEPCP--SEASPVCGTDMRTYASRCHLQLAKCKGHKVKMIYKGRC 249
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQAC 452
C ++CP T++ PVCG+D TY N L A AC
Sbjct: 3970 CNKNCPSTSK--PVCGSDGKTYKNECELKRA-AC 4000
>SB_38508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 30.7 bits (66), Expect = 0.90
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 73 MDKLVVFFLFAIITNVLCMSVRNKRQSNDDDDVLDD 180
M ++F A+ TN++C N ND+D+ DD
Sbjct: 15 MGPQIIFEYVAMATNIICTCTNNNNNDNDNDNDDDD 50
>SB_52414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 318 GTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLPC 488
G + +P +++C S T YN C N TY +P R TC C + LPC
Sbjct: 193 GRISFNPKLEKCCDSILSTYSYNAQC-CGNTTY-DPTRQTC---CNGTIHKKPGLPC 244
>SB_12293| Best HMM Match : OATP (HMM E-Value=0)
Length = 1446
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 372 TAEYNPVCGTDNITYNNPGRLTCAQACG 455
+ +Y PVCG D ITY +P C + G
Sbjct: 907 STDYFPVCGVDKITYFSPCYAGCQKRIG 934
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 384 NPVCGTDNITYNNPGRLTCAQACGINVSV 470
+PVCG+DN TY+N L QAC N +V
Sbjct: 8 DPVCGSDNNTYDNE-CLMRQQACVANTTV 35
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 315 LGTTTMSPAIQQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVL 473
+ TT++ + CP T + PV GTDN Y+N L A AC N +L
Sbjct: 30 VANTTVAVRRKGDCEPCPKTLK--PVYGTDNKNYDNECLLKLA-ACKSNTRIL 79
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 363 CPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLPC---PTATQAPPAKLIKIV 533
CP ++ P CG D NN G CAQ C + V + C P T A K + +
Sbjct: 1153 CPDASDEGPGCGLDQCHSNNGG---CAQLC---MDVPEGVQCSCRPGFTLASDNKTCEDI 1206
Query: 534 NQIIKNMS 557
N+ + + S
Sbjct: 1207 NECLNSSS 1214
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/68 (41%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Frame = +3
Query: 381 YNPVCGTDNITYNNPGRLTCAQACGINV------SVLRSLPCPTA-TQAP-PAKLIKI-- 530
Y VCG TYNNP L C + N S R L CPT P PAK I+
Sbjct: 13 YRLVCGICQETYNNPKVLPCLHSFCQNCLDKSIRSQERVLVCPTCQCSVPVPAKGIEAFP 72
Query: 531 VNQIIKNM 554
VN I NM
Sbjct: 73 VNFFINNM 80
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 348 QCIRSCPVTAEYNPVCGTDNITYNN 422
+C+ CP PVCG+D +TY N
Sbjct: 80 ECLSECP--DHIKPVCGSDGVTYPN 102
>SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 839
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 85 VVFFLFAIITNVLCMSVRNKRQSNDDDDVLDDRYG 189
++ F F II VL VRN+R+ D ++ +RYG
Sbjct: 69 IILFAFVIIIAVLL--VRNRRRKRDSTELKGNRYG 101
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = +3
Query: 348 QCIRSCPV--TAEYNPVCGTDNITY 416
Q + CP+ T EY PVCG+D TY
Sbjct: 42 QPVCECPMACTREYAPVCGSDGKTY 66
>SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 352
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 345 QQCIRSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGI 458
+ C R CP PVCG+D ++Y+N AQ +
Sbjct: 33 KDCSRPCPRIL--TPVCGSDRVSYSNMCAFRNAQCLAV 68
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 357 RSCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSL 482
R+CP + PVCG+D TY N L A+ C + R L
Sbjct: 238 RTCP--KQDKPVCGSDGKTYTNGCELATAK-CALPKGQKRQL 276
>SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16)
Length = 98
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNNPGRLTCA 443
C R+C Y+P+CGTD TY N L A
Sbjct: 39 CNRACKKI--YSPMCGTDGKTYGNKCMLEIA 67
>SB_37368| Best HMM Match : Kazal_1 (HMM E-Value=9.2e-09)
Length = 68
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 351 CIRSCPVTAEYNPVCGTDNITYNN 422
C SC PVCG+D++TY N
Sbjct: 8 CSFSCDDGFHQTPVCGSDDVTYAN 31
>SB_30872| Best HMM Match : KID (HMM E-Value=4.7)
Length = 294
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 438 CAQACGINVSVLRSLPCPTATQAPPAKLIKIV 533
C CG + ++ S P Q PP L+ I+
Sbjct: 245 CGDLCGYQIHIVNSTPSTRTCQPPPINLMDIM 276
>SB_21310| Best HMM Match : Peptidase_C33 (HMM E-Value=3.4)
Length = 258
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 361 LRMHC*IAGDIVVVPRLLGARVVVKRCCCPGN*PWP 254
L C + G VV+P L AR + C G PWP
Sbjct: 216 LHEECVMRGHRVVIPSALRARESFRNCQDEGACPWP 251
>SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07)
Length = 322
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 295 RLGLPTIWAPPQCRLQ 342
RL +P+IW PP+ RLQ
Sbjct: 174 RLAVPSIWVPPEQRLQ 189
>SB_5319| Best HMM Match : Ldl_recept_a (HMM E-Value=7.56701e-44)
Length = 212
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 363 CPVTAEYNPVCGTDNITYNNPGRLTCAQAC 452
CP ++ P CG D NN G CAQ C
Sbjct: 180 CPDASDEGPGCGLDQCHSNNGG---CAQLC 206
>SB_4860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +3
Query: 366 PVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLPCPTATQAPPAKLIK 527
PV A NP GR+ C I++ R+LP T + P + +++
Sbjct: 43 PVCAVTNPARSIQGENRTESGRMLCNNPARIHLGEGRNLPSHTRSNNPASSILR 96
>SB_57511| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 879
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 381 YNPVCGTDNITYNNPGRLTCAQACG 455
YN C YNN G TCA G
Sbjct: 767 YNNPCANQGTCYNNDGSYTCACVAG 791
>SB_5622| Best HMM Match : DUF6 (HMM E-Value=2.6e-12)
Length = 224
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 43 VISILHFQEIMDKLVVFFLFAIITNVLCMSVRNKRQSNDDDDVLDDRYGW 192
V+S L E+M+ L II +L + N + + D+ LDD YG+
Sbjct: 175 VLSYLVLDEVMNSLQYAGGVLIILGLLGVVWSNYSEEKERDENLDDSYGY 224
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 360 SCPVTAEYNPVCG-TDNITYNNP 425
+CPV A +NPVC T Y NP
Sbjct: 2007 NCPVGANFNPVCNKTTGECYCNP 2029
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,006,429
Number of Sequences: 59808
Number of extensions: 315917
Number of successful extensions: 1205
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -