Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30463
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    37   0.009
U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical pr...    32   0.26 
U23523-5|AAC46556.1|   77|Caenorhabditis elegans Hypothetical pr...    31   0.45 
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    29   1.8  
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    29   1.8  
Z70212-2|CAA94163.1|  430|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    27   7.3  
AL132860-25|CAB60510.1|  413|Caenorhabditis elegans Hypothetical...    27   7.3  

>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 363 CPVTAEYNPVCGTDNITYNNPGRLTCAQ 446
           C   +   PVCGTDN+TYNN   L C Q
Sbjct: 19  CDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46


>U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical
           protein K02G10.5 protein.
          Length = 655

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 AIQQCIRSCPVTAEYNPVCGTDN-ITYNNPGRLTCAQACGI 458
           A++ C  +C   + +NPVC  D+ +T+ +P    CA   GI
Sbjct: 441 ALETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCADMPGI 481


>U23523-5|AAC46556.1|   77|Caenorhabditis elegans Hypothetical
           protein F53A9.1 protein.
          Length = 77

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 242 PVYSRPGSVPRTTATFNYDSGSQQSGHHHN 331
           PVY  PG +P  T   + D G     HHH+
Sbjct: 21  PVYGAPGYMPPQTVHVHTDGGHHHGHHHHH 50


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 363 CP-VTAEYNPVCGTDNITYNNPGRLTCAQAC 452
           CP  T E+  VCG+D  TY+N  RL  A AC
Sbjct: 465 CPSCTDEFKEVCGSDGKTYSNECRLQNA-AC 494



 Score = 29.1 bits (62), Expect = 2.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 360 SCPVTAEYNPVCGTDNITYNN 422
           +C +++ Y P+CG+D I YNN
Sbjct: 685 TCNLSSNY-PICGSDGIVYNN 704


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 363 CP-VTAEYNPVCGTDNITYNNPGRLTCAQAC 452
           CP  T E+  VCG+D  TY+N  RL  A AC
Sbjct: 473 CPSCTDEFKEVCGSDGKTYSNECRLQNA-AC 502


>Z70212-2|CAA94163.1|  430|Caenorhabditis elegans Hypothetical
           protein R04D3.3 protein.
          Length = 430

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 139 NKRQSNDDDDVLDD 180
           N+R  NDDDD+LDD
Sbjct: 302 NRRSRNDDDDILDD 315


>U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical
           protein F53A9.2 protein.
          Length = 83

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 242 PVYSRPGSVPRTTATFNYDSGSQQSGHHHN 331
           PVY  PG  P T     +  G    GHHH+
Sbjct: 21  PVYGTPGLAPPTVHV--HTDGGHHHGHHHH 48


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 360 SCPVTAEYNPVCGTDNITYNNPGRLTCAQACGINVSVLRSLPCPTATQAP 509
           +C  T E + +   + + +N      C++AC    +   +   PT TQAP
Sbjct: 89  NCVSTCESSCLESCNRLNFNMKCSSVCSEACEFTCAKQGTSTTPTTTQAP 138


>AL132860-25|CAB60510.1|  413|Caenorhabditis elegans Hypothetical
           protein Y56A3A.31 protein.
          Length = 413

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 188 AGSLPPGLQGSSLGKDFSPVYSRPGSVPRTTAT 286
           AGS PPG  G+      +P  S P S   TT T
Sbjct: 26  AGSSPPGAAGTPSAASQTPTTSTPPSSTTTTLT 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,624,278
Number of Sequences: 27780
Number of extensions: 233175
Number of successful extensions: 725
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)