Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30463
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.7  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   6.7  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 419 IVSYIISATNWIVLSGYWAATNALLNC 339
           + +Y+I   NW +    W   + L+NC
Sbjct: 258 VPTYLIKWKNWDLKYNTWEPISNLINC 284


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 417 CKLYYQCHKLDCTQRLL 367
           CKL+  C  L CT  +L
Sbjct: 109 CKLWLTCDVLCCTASIL 125


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 417 CKLYYQCHKLDCTQRLL 367
           CKL+  C  L CT  +L
Sbjct: 109 CKLWLTCDVLCCTASIL 125


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 317  GHHHNVACNSTMH 355
            G+HHNV  + T+H
Sbjct: 1678 GYHHNVNKHCTIH 1690


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 417 CKLYYQCHKLDCTQRLL 367
           CKL+  C  L CT  +L
Sbjct: 109 CKLWLTCDVLCCTASIL 125


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +2

Query: 194 SLPPGLQGSSLGKDFSPVYSRPGSVPRTTATFNYDSGSQQSGHHHN 331
           S P  L G     D      + G  PR         G + SG+H+N
Sbjct: 156 SQPGSLNGYG-SSDGCDARKKKGPTPRQQEELCLVCGDRASGYHYN 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,226
Number of Sequences: 438
Number of extensions: 2915
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)