Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30462
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 97 5e-20
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 94 4e-19
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 91 3e-18
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 91 3e-18
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 81 3e-15
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.1 bits (231), Expect = 5e-20
Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVTDLLHSI 527
RH GKRVV + L SGLLLVTDL SI
Sbjct: 156 RHRGKRVVFLKQLASGLLLVTDLWSSI 182
Score = 47.2 bits (107), Expect = 5e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 533 PLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 185 PLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 94.3 bits (224), Expect = 4e-19
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 35 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 94
Query: 447 RHAGKRVVLVGILPSGLLLVTDLLHSIRARY 539
RH GKRVV + L SGLLLVT L SI Y
Sbjct: 95 RHRGKRVVFLKQLASGLLLVTGPLVSIEFLY 125
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKRVVLVGILPSGLLLVT 509
RH GKRVV + L SGLLLVT
Sbjct: 156 RHRGKRVVFLKQLASGLLLVT 176
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 177 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 217
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 81.4 bits (192), Expect = 3e-15
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Frame = +3
Query: 273 IGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAG 446
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G
Sbjct: 96 VGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTG 155
Query: 447 RHAGKR-VVLVGILPSGLLLVT 509
R GK VV + L SGLLLVT
Sbjct: 156 RRRGKNWVVFLKQLASGLLLVT 177
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 631
GP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 178 GPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,352,819
Number of Sequences: 237096
Number of extensions: 2210690
Number of successful extensions: 4468
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4454
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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