Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30460
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p pro...   103   2e-22
AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.     103   2e-22
AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-li...   103   2e-22
AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA...   103   2e-22
BT003801-1|AAO41484.1|  504|Drosophila melanogaster AT23571p pro...    29   7.2  
AJ294538-1|CAC82378.1|  660|Drosophila melanogaster Lasp protein...    29   7.2  
AE014296-2785|AAN11739.2|  657|Drosophila melanogaster CG3849-PB...    29   7.2  
AE014296-2784|AAF49426.3|  504|Drosophila melanogaster CG3849-PA...    29   7.2  
AE014134-1917|AAF52975.1|  510|Drosophila melanogaster CG6138-PB...    28   9.5  
AE013599-2934|AAF57531.1|  242|Drosophila melanogaster CG15905-P...    28   9.5  

>AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p
           protein.
          Length = 90

 Score =  103 bits (247), Expect = 2e-22
 Identities = 49/53 (92%), Positives = 51/53 (96%), Gaps = 1/53 (1%)
 Frame = +1

Query: 100 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVV 255
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVV
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVV 53



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 255 RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 359
           RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 54  RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.
          Length = 90

 Score =  103 bits (247), Expect = 2e-22
 Identities = 49/53 (92%), Positives = 51/53 (96%), Gaps = 1/53 (1%)
 Frame = +1

Query: 100 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVV 255
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVV
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVV 53



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 255 RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 359
           RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 54  RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-like
           protein SMT3 protein.
          Length = 90

 Score =  103 bits (247), Expect = 2e-22
 Identities = 49/53 (92%), Positives = 51/53 (96%), Gaps = 1/53 (1%)
 Frame = +1

Query: 100 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVV 255
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVV
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVV 53



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 255 RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 359
           RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 54  RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA
           protein.
          Length = 90

 Score =  103 bits (247), Expect = 2e-22
 Identities = 49/53 (92%), Positives = 51/53 (96%), Gaps = 1/53 (1%)
 Frame = +1

Query: 100 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVV 255
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVV
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVV 53



 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 255 RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 359
           RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 54  RFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>BT003801-1|AAO41484.1|  504|Drosophila melanogaster AT23571p
           protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 293 HSNIT*DGRGRHNRGLPTADRRSVPSV 373
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263


>AJ294538-1|CAC82378.1|  660|Drosophila melanogaster Lasp protein
           protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 293 HSNIT*DGRGRHNRGLPTADRRSVPSV 373
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 393 HSNINNNGHGSQNQMLPPQMRRSAASV 419


>AE014296-2785|AAN11739.2|  657|Drosophila melanogaster CG3849-PB,
           isoform B protein.
          Length = 657

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 293 HSNIT*DGRGRHNRGLPTADRRSVPSV 373
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 390 HSNINNNGHGSQNQMLPPQMRRSAASV 416


>AE014296-2784|AAF49426.3|  504|Drosophila melanogaster CG3849-PA,
           isoform A protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 293 HSNIT*DGRGRHNRGLPTADRRSVPSV 373
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263


>AE014134-1917|AAF52975.1|  510|Drosophila melanogaster CG6138-PB,
           isoform B protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 537 KHYASQITCGKVNYKYTKCCR 599
           K  A Q+ CG+V YKY+ C +
Sbjct: 321 KRMAEQLCCGRVIYKYSYCSK 341


>AE013599-2934|AAF57531.1|  242|Drosophila melanogaster CG15905-PA
           protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 276 PINENDTPTSLEMEEGDTIEVYQQQTG 356
           PI E +TPT+ EM +   +   Q+QTG
Sbjct: 18  PIEEAETPTTSEMPDSGRVVFDQRQTG 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,487,932
Number of Sequences: 53049
Number of extensions: 516354
Number of successful extensions: 1065
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)