Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30459
         (790 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q11Q42 Cluster: Outer membrane protein; n=1; Cytophaga ...    34   3.5  
UniRef50_A0C5I4 Cluster: Chromosome undetermined scaffold_15, wh...    33   6.2  
UniRef50_Q077R1 Cluster: WfaQ; n=1; Escherichia coli|Rep: WfaQ -...    33   8.2  
UniRef50_A7Q8B7 Cluster: Chromosome chr14 scaffold_63, whole gen...    33   8.2  

>UniRef50_Q11Q42 Cluster: Outer membrane protein; n=1; Cytophaga
           hutchinsonii ATCC 33406|Rep: Outer membrane protein -
           Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 416

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 17/54 (31%), Positives = 34/54 (62%)
 Frame = +1

Query: 16  SIDEPIETKKTKPDPQYLLSSANIQNMDIDSVLEKLHGP*QIDMLLMWALLIRS 177
           SID  ++ +    D Q+L++S+ I+++DI+  ++ +  P  +D L+  AL +RS
Sbjct: 195 SIDAQLDLRNELNDLQFLINSSYIKSVDINDKIDLVDIPSNLDSLISIALRMRS 248


>UniRef50_A0C5I4 Cluster: Chromosome undetermined scaffold_15, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_15,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 383

 Score = 33.5 bits (73), Expect = 6.2
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = -3

Query: 788 SLYIDLLFYTKIKTYIYICAVLLKERVLKVLFYHKNYQCLVISHHSASSRFCFPPD 621
           SLY  +LFY  +K  +     LLK  ++KV  +   +Q L +S        CF PD
Sbjct: 214 SLYYLILFYYALKHPLQPYKPLLKFLIIKVTLFFTFWQSLTLSIFEEEISSCFEPD 269


>UniRef50_Q077R1 Cluster: WfaQ; n=1; Escherichia coli|Rep: WfaQ -
           Escherichia coli
          Length = 362

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = -2

Query: 429 IMIVSFPLKITQFTCTKFTISLKWLAQ*HITLYYLNILINPITVGLNYVFYTYNFIVLI 253
           I++ +FPL    F   K +   KW+   H+  YY NIL+  I    ++++  Y+ IVL+
Sbjct: 98  IVVHTFPLAFINFFTEKRS---KWVVVEHVKYYYYNILLRRIR---SFIYDKYDAIVLL 150


>UniRef50_A7Q8B7 Cluster: Chromosome chr14 scaffold_63, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr14 scaffold_63, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 506

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 14/30 (46%), Positives = 24/30 (80%)
 Frame = -1

Query: 121 TFLVLNLYPYFEYLQMTINIVDPVLFSLFQ 32
           +FL+LN+YPY++Y+Q   N V P+ ++LF+
Sbjct: 201 SFLMLNIYPYYDYMQS--NGVIPLDYALFK 228


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,946,941
Number of Sequences: 1657284
Number of extensions: 13397232
Number of successful extensions: 25915
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25912
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)