Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30456
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   6.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   6.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 361  WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS 477
            W+S ++   W  T    +  +R   +S   RPT  ++P+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081



 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 400  PVSTSHWSRTRQSSLPRRPT 459
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 612  PSKPSVLSNSSTGVQPVSRSVSTTSHP 692
            P+KPS    S+T       + STT+ P
Sbjct: 1169 PTKPSYRPPSTTNHWQTKTTTSTTTRP 1195


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 436 SSLPRRPTMNSFPSPRSQTHASSPQPDGEMRPPS 537
           S+ PR  +  +  S  S + ASS  PD E+R  S
Sbjct: 120 SAAPRTASRET-KSSESDSGASSADPDDELRSSS 152


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +1

Query: 580 RTQGCERGHRYHQNQAYYPIRRLVSNRFQGRY--QLPATHRGARXRLGQGSTCRLHV 744
           R    ER      N  +  +R+ +       +  Q P+T RGA  +L +  T RL V
Sbjct: 89  RRNARERNRVKQVNNGFATLRQHIPASVAAAFAPQGPSTGRGASKKLSKVETLRLAV 145


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 549 WLAVCCTVVTSYPRM 593
           W  VC  VV  YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 569 GTAYSKPCTCHDGGRISPSG 510
           G A++ P   HD G  SP G
Sbjct: 50  GNAHTGPTGTHDAGFPSPRG 69


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 400 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPQPDG 519
           P+    ++     S+P  PT+++ P P      S+P  DG
Sbjct: 385 PLINILYANMNSYSVPE-PTISTTPRPEWARPPSTPSADG 423


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,837
Number of Sequences: 336
Number of extensions: 4240
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)