Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30456
(752 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 71 4e-14
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 71 4e-14
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 71 4e-14
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 71 4e-14
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 27 0.82
AY330180-1|AAQ16286.1| 176|Anopheles gambiae odorant-binding pr... 25 3.3
AJ618924-1|CAF02003.1| 144|Anopheles gambiae odorant-binding pr... 25 3.3
AF393486-1|AAL60411.1| 162|Anopheles gambiae twelve cysteine pr... 25 3.3
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 24 5.8
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 24 5.8
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 7.7
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 7.7
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 4e-14
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 255 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 434
R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 168
Query: 435 VISAEKAYHEQLSVAEIT 488
+ S + L+V E+T
Sbjct: 169 LTSRGSQQYRALTVPELT 186
Score = 69.3 bits (162), Expect = 1e-13
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +1
Query: 7 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 186
LQGF + H LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+
Sbjct: 26 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 85
Query: 187 HTTLEHSDCAFMVDNEAIYDIC 252
H +E++D + +DNEA+YDIC
Sbjct: 86 HQLVENTDETYCIDNEALYDIC 107
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 4e-14
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 255 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 434
R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 168
Query: 435 VISAEKAYHEQLSVAEIT 488
+ S + L+V E+T
Sbjct: 169 LTSRGSQQYRALTVPELT 186
Score = 69.3 bits (162), Expect = 1e-13
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +1
Query: 7 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 186
LQGF + H LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+
Sbjct: 26 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 85
Query: 187 HTTLEHSDCAFMVDNEAIYDIC 252
H +E++D + +DNEA+YDIC
Sbjct: 86 HQLVENTDETYCIDNEALYDIC 107
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 4e-14
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 255 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 434
R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 168
Query: 435 VISAEKAYHEQLSVAEIT 488
+ S + L+V E+T
Sbjct: 169 LTSRGSQQYRALTVPELT 186
Score = 69.3 bits (162), Expect = 1e-13
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +1
Query: 7 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 186
LQGF + H LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+
Sbjct: 26 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 85
Query: 187 HTTLEHSDCAFMVDNEAIYDIC 252
H +E++D + +DNEA+YDIC
Sbjct: 86 HQLVENTDETYCIDNEALYDIC 107
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.9 bits (166), Expect = 4e-14
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 255 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 434
R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP
Sbjct: 109 RTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 168
Query: 435 VISAEKAYHEQLSVAEIT 488
+ S + L+V E+T
Sbjct: 169 LTSRGSQQYRALTVPELT 186
Score = 69.3 bits (162), Expect = 1e-13
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +1
Query: 7 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 186
LQGF + H LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+
Sbjct: 26 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSI 85
Query: 187 HTTLEHSDCAFMVDNEAIYDIC 252
H +E++D + +DNEA+YDIC
Sbjct: 86 HQLVENTDETYCIDNEALYDIC 107
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.82
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +1
Query: 358 MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPQPDGEMRPP 534
+WT P+ TW P +T+ WS + T+ + P+ + THA + PP
Sbjct: 158 IWTDPT---TWS-APTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPP 212
>AY330180-1|AAQ16286.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP54 protein.
Length = 176
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 488 KRMLRARNQMVKCDPRHGKYMACCMLYRGDVVPKD 592
K+ ++ R+ +KC P +M C M + P+D
Sbjct: 124 KKKIQERDHDMKCSPVGAFFMMCLMKHTQAKCPED 158
>AJ618924-1|CAF02003.1| 144|Anopheles gambiae odorant-binding
protein OBP5470 protein.
Length = 144
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 488 KRMLRARNQMVKCDPRHGKYMACCMLYRGDVVPKD 592
K+ ++ R+ +KC P +M C M + P+D
Sbjct: 87 KKKIQERDHDMKCSPVGAFFMMCLMKHTQAKCPED 121
>AF393486-1|AAL60411.1| 162|Anopheles gambiae twelve cysteine
protein 1 protein.
Length = 162
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 488 KRMLRARNQMVKCDPRHGKYMACCMLYRGDVVPKD 592
K+ ++ R+ +KC P +M C M + P+D
Sbjct: 124 KKKIQERDHDMKCSPVGAFFMMCLMKHTQAKCPED 158
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 23.8 bits (49), Expect = 5.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 749 WTTCRRHVEPWPSRXRAPRW 690
W+T +RHV+ P+R W
Sbjct: 202 WSTLKRHVKNQPARSADDLW 221
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 23.8 bits (49), Expect = 5.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2
Query: 598 VHILGYDVTTVQHTASHV 545
+H + Y ++TV HTAS++
Sbjct: 733 IHTIEYVLSTVSHTASYL 750
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.4 bits (48), Expect = 7.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 745 QHADGTLNLGQVASGH 698
+H D T +L QV SGH
Sbjct: 971 KHGDMTFHLAQVLSGH 986
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.4 bits (48), Expect = 7.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 745 QHADGTLNLGQVASGH 698
+H D T +L QV SGH
Sbjct: 983 KHGDVTFHLSQVLSGH 998
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,190
Number of Sequences: 2352
Number of extensions: 20359
Number of successful extensions: 55
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -