Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30455
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   1.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   5.9  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   7.7  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 163 AISREVALRTHKLGPLNIIRTTVT 234
           A+ R++ L TH+L  LN+ R  +T
Sbjct: 519 AVPRDLLLNTHELQRLNLTRNNIT 542


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +3

Query: 690 YE*MNTDDGQCNKTLSIKRKKKK 758
           YE M   + +C++ L++K +K+K
Sbjct: 351 YEAMRRKEEECSRELNLKEQKRK 373


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 176 RWRSGPTSLGRSIL 217
           RWRS  TSL R+IL
Sbjct: 15  RWRSAQTSLCRTIL 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,479
Number of Sequences: 2352
Number of extensions: 9228
Number of successful extensions: 51
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)