Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30454
(501 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 121 5e-29
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 116 2e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 93 2e-20
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 51 9e-08
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 44 2e-05
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.042
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 31 0.097
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 31 0.13
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.22
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.30
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.39
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 28 0.69
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 0.91
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 1.6
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 1.6
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 2.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 2.8
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 2.8
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 3.7
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 3.7
SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|... 26 3.7
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.7
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 3.7
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 4.8
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 6.4
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 25 6.4
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 6.4
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 6.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 6.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.4
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 8.4
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 25 8.4
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 8.4
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 8.4
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 121 bits (292), Expect = 5e-29
Identities = 58/110 (52%), Positives = 77/110 (70%)
Frame = +3
Query: 3 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 182
ITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 501 ITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKV 560
Query: 183 SDSDKQTILDKCNEHHQVAGFQPTADKEEYEHKQXXLXGICNPIXXKMYQ 332
SDK+ I E + TA K+EYE KQ L G+ NPI K+YQ
Sbjct: 561 DASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 116 bits (280), Expect = 2e-27
Identities = 56/110 (50%), Positives = 76/110 (69%)
Frame = +3
Query: 3 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 182
ITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 501 ITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKV 560
Query: 183 SDSDKQTILDKCNEHHQVAGFQPTADKEEYEHKQXXLXGICNPIXXKMYQ 332
SDK+T+ E + TA K+E+E KQ L + NPI K+YQ
Sbjct: 561 DASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 93.1 bits (221), Expect = 2e-20
Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Frame = +3
Query: 3 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEK 179
I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K
Sbjct: 531 IKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGK 590
Query: 180 ISDSDKQTILDKCNEHHQVAGFQ-PTADKEEYEHKQXXLXGICNPIXXKMY 329
+ DKQ +LD + + A KEE+E ++ L + +PI K+Y
Sbjct: 591 VDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 51.2 bits (117), Expect = 9e-08
Identities = 22/68 (32%), Positives = 41/68 (60%)
Frame = +3
Query: 3 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 182
ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + + K+
Sbjct: 506 ITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKL 565
Query: 183 SDSDKQTI 206
DK I
Sbjct: 566 KRGDKSKI 573
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 43.6 bits (98), Expect = 2e-05
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 24 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEKISDSDK 197
L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++ + +
Sbjct: 550 LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLR 609
Query: 198 QTILD 212
I D
Sbjct: 610 SKITD 614
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.042
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +3
Query: 33 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 212
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 213 K 215
K
Sbjct: 79 K 79
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 31.1 bits (67), Expect = 0.097
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 3 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED 161
++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 544 VSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDD 596
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.7 bits (66), Expect = 0.13
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +3
Query: 30 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 209
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 210 DKCNEHHQVAGFQPTADKEEYEHK 281
D C Q+ F+ D E K
Sbjct: 754 DGCTTSSQLGLFEKKGDLVNDEDK 777
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.22
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +3
Query: 27 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 194
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.30
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 15 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 194
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 195 KQTILDKCNE 224
+ LDK +
Sbjct: 1318 EMEDLDKMED 1327
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.39
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 15 KGRLSKEEIERMVNEAEKYRNEDD 86
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 28.3 bits (60), Expect = 0.69
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 78 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNEH 227
E DK ET+ K A+ S+ +++++++ K+S D L+ CN H
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNH 284
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 0.91
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +3
Query: 15 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 185
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 186 DSDKQ--TILDKCNEHHQVAGFQPTADKE 266
D D++ T+ DK N+ ++ Q D+E
Sbjct: 281 DKDQEQDTVSDK-NQIDEIEKGQKEVDEE 308
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 1.6
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +3
Query: 3 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 182
+T + R S E V + E ++D + +++NA + S + + +KEK
Sbjct: 242 LTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKEKQ 299
Query: 183 SDSDKQTILDKCNEHHQVAGFQPTADKEEYE 275
S +K DK +++ F+P K+ +E
Sbjct: 300 SKIEKYMKSDKSSKN-----FKPPFQKKSWE 325
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 1.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 48 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 152
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 2.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 33 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 203
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 2.8
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 9 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 185
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 186 DSDKQT 203
+D+ T
Sbjct: 695 -TDRLT 699
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 27 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 149
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 3.7
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 33 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKE 176
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKE 538
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 15 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 125
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 25.8 bits (54), Expect = 3.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 228 HQVAGFQPTADKEEYEHKQXXL 293
H + GFQP+ +E+Y+H L
Sbjct: 290 HHLNGFQPSQRQEDYKHTMVDL 311
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.8 bits (54), Expect = 3.7
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 15 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 194
K S I V + E+ + D T+Q K +S FS K + E L +KIS+ D
Sbjct: 390 KALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLLKKISEID 444
Query: 195 KQTILDKC 218
QT ++C
Sbjct: 445 SQTSFEQC 452
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 3.7
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +3
Query: 30 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 209
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 210 D 212
D
Sbjct: 451 D 451
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.4 bits (53), Expect = 4.8
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 108 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNEHHQVAGFQPTADKEE 269
+ NA+E + + ++ L+E +S + + +LD C ++ + F AD+ +
Sbjct: 693 SSNAIEQCIRTASPSTREQMLQEFLSFPNIEQLLDDCYANYVMQRFLNVADESQ 746
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.0 bits (52), Expect = 6.4
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 12 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 191
DK + E+I + ++Y NED+ + +++ A S+ ++ +T++ + KI +S
Sbjct: 399 DKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITNTIQAKYSNRKIKNS 457
Query: 192 DKQTILDKCNEHHQV 236
+ L++ ++V
Sbjct: 458 NITRSLNRLVRKNRV 472
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.0 bits (52), Expect = 6.4
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 12 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 188
D SKEE+E +V E E D +Q + K+ L++ F ++ KLK+K S+
Sbjct: 539 DPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNRKLKKKASN 588
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 6.4
Identities = 18/102 (17%), Positives = 41/102 (40%)
Frame = +3
Query: 3 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 182
+ +K SKE ++ EAE+ E +E + + + S K +++ K K +
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDELKAKAED 492
Query: 183 SDSDKQTILDKCNEHHQVAGFQPTADKEEYEHKQXXLXGICN 308
++ L +++ + Q + E + ++ I N
Sbjct: 493 AERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIAN 534
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 6.4
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 24 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 194
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.0 bits (52), Expect = 6.4
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 27 SKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 158
S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 297 SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 24.6 bits (51), Expect = 8.4
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Frame = +3
Query: 30 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 182
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 183 SDSDKQTI 206
K +I
Sbjct: 547 PSRFKTSI 554
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 24.6 bits (51), Expect = 8.4
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 15 KGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 191
+G + + E E EAE ++ ++D+ ++E ++ L S S E+E+ E SD
Sbjct: 194 EGLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEESSESESDE 253
Query: 192 DK 197
D+
Sbjct: 254 DE 255
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 24.6 bits (51), Expect = 8.4
Identities = 23/87 (26%), Positives = 36/87 (41%)
Frame = +3
Query: 33 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 212
EE E V E +E ++K + S S ++ +KL EKI+ K+
Sbjct: 147 EEDEDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKL-EKITKKKKKEHKK 205
Query: 213 KCNEHHQVAGFQPTADKEEYEHKQXXL 293
K E ++DKEE + K+ L
Sbjct: 206 KDKESSSKKRKSGSSDKEEKKKKKIKL 232
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 24.6 bits (51), Expect = 8.4
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Frame = +3
Query: 12 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 161
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 162 ---EKLKEKISDSDKQTILD 212
EK++EK+++ DK ++ D
Sbjct: 787 ENIEKIEEKLTEVDKVSLSD 806
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 138 SMKSTMEDEKLKEKISD 188
S+K MEDEKL EK+++
Sbjct: 114 SLKLIMEDEKLIEKVNE 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,655,757
Number of Sequences: 5004
Number of extensions: 26979
Number of successful extensions: 136
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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