Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30451
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CU89 Cluster: Putative uncharacterized protein; n=2; ...    34   4.0  
UniRef50_Q22U63 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  

>UniRef50_Q5CU89 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 808

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 338 SNQSDAWFSSYNVTSVKTTVD-LFISIDNYDAKNKHVSILDFGQKFV 475
           +NQ+D  FSS N    +T +  L + +DN + KN++V ++ F  K +
Sbjct: 743 NNQNDDQFSSKNSNDSRTLLTTLLLCLDNVEKKNQNVIVIAFSNKHI 789


>UniRef50_Q22U63 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 795

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +2

Query: 287 NISLSIKYMYFLHGYQVSNQSDAWFSSYNVTSVKTTVDLFISIDNYDAKNKHVSILDFGQ 466
           NI+ SIK  +      + N+   + +S N    +T VD FI +D+   +   VSI+DF Q
Sbjct: 217 NINQSIKSSFSEEYGTIKNRYFQFDTSKNEGIKETNVDNFIEVDDKQEQKSSVSIIDFDQ 276


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,793,047
Number of Sequences: 1657284
Number of extensions: 8861992
Number of successful extensions: 19616
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19616
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)